| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | cccgatga | 8 | ||
| VMR_1108 | rrv-miR-rr1-3 | 1 | ........ | 8 | 100 |
| VMR_0958 | rlcv-miR-rl1-10-5p | 6 | ......__ | 1 | 75 |
| VMR_0957 | rlcv-miR-rl1-10-5p | 6 | ......__ | 1 | 75 |
| VMR_0956 | rlcv-miR-rl1-10-5p | 6 | ......__ | 1 | 75 |
