Result for your query miRNA sequence
>rcmv-miR-r111.1-2
cgaaaca

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgaaaca7
VMR_0895 rcmv-miR-r111.1-2 2.......8100
VMR_0894 rcmv-miR-r111.1-2 2.......8100
VMR_0893 rcmv-miR-r111.1-2 2.......8100
VMR_0908 rcmv-miR-r111.2-4 3......_885
VMR_0907 rcmv-miR-r111.2-4 3......_885
VMR_0234 hcmv-miR-us22-5p6 6_......185