Result for your query miRNA sequence
>mcmv-miR-m01-3*
cgaggaac

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgaggaac8
VMR_0425 mcmv-miR-m01-3* 1........8100
VMR_1018 rlcv-miR-rl1-28-3p 1_......_675
VMR_0875 prv-miR-9-5p 1......__675
VMR_0874 prv-miR-9-5p 2......__775
VMR_0873 prv-miR-9-5p 3......__875
VMR_0871 prv-miR-9-5p 1......__675
VMR_0870 prv-miR-9-5p 2......__775
VMR_0869 prv-miR-9-5p 3......__875
VMR_0866 prv-miR-9-5p 1......__675
VMR_0865 prv-miR-9-5p 2......__775
VMR_0864 prv-miR-9-5p 3......__875
VMR_0862 prv-miR-9-5p 1......__675
VMR_0861 prv-miR-9-5p 2......__775
VMR_0860 prv-miR-9-5p 3......__875
VMR_0858 prv-miR-9-5p 1......__675
VMR_0857 prv-miR-9-5p 2......__775
VMR_0856 prv-miR-9-5p 3......__875
VMR_0854 prv-miR-9-5p 2......__775
VMR_0853 prv-miR-9-5p 3......__875
VMR_0851 prv-miR-9-5p 2......__775
VMR_0850 prv-miR-9-5p 3......__875
VMR_0848 prv-miR-9-5p 2......__775
VMR_0847 prv-miR-9-5p 3......__875
VMR_0664 prv-miR-2-3p 2......__775
VMR_0568 ohv2-miR-17-24 8__......375
VMR_0543 mghv-miR-m1-4 2......__775