| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | cgccata | 7 | ||
| VMR_1252 | tumv-miR-s69 | 2 | ....... | 8 | 100 |
| VMR_0941 | rhcmv-miR-rh156-1 | 8 | ....... | 2 | 100 |
| VMR_0022 | bhv1-miR-b10 | 8 | ......_ | 3 | 85 |
