Result for your query miRNA sequence
>rrv-miR-rr1-6
cgcggaaa

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgcggaaa8
VMR_1135 rrv-miR-rr1-6-5p 1........8100
VMR_1134 rrv-miR-rr1-6-5p 1........8100
VMR_1129 rrv-miR-rr1-6 1........8100
VMR_0913 rcmv-miR-r111.2-6 3......__875
VMR_0912 rcmv-miR-r111.2-6 3......__875
VMR_0911 rcmv-miR-r111.2-6 3......__875
VMR_0625 prv-miR-11-1 7_......_275
VMR_0616 prv-miR-11-1 6_......_175
VMR_0612 prv-miR-11-1 6_......_175
VMR_0594 prv-miR-10-1 6......__175
VMR_0594 prv-miR-10-1 3......__875
VMR_0349 hvsa-miR-hsur5-5p 6......__175
VMR_0281 hsv1-miR-40262b 7__......275
VMR_0064 dev-miR-d12-3p 7......__275