Result for your query miRNA sequence
>rcmv-miR-r111.1-3
cgggggc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cgggggc7
VMR_0897 rcmv-miR-r111.1-3 2.......8100
VMR_0896 rcmv-miR-r111.1-3 2.......8100
VMR_0318 hsv1-miR-h8* 7.......1100
VMR_0820 prv-miR-8-5p 1_......685
VMR_0819 prv-miR-8-5p 2_......785
VMR_0818 prv-miR-8-5p 3_......885
VMR_0817 prv-miR-8-5p 2_......785
VMR_0816 prv-miR-8-5p 3_......885
VMR_0813 prv-miR-8-5p 2_......785
VMR_0812 prv-miR-8-5p 3_......885
VMR_0810 prv-miR-8-5p 2_......785
VMR_0809 prv-miR-8-5p 3_......885
VMR_0804 prv-miR-8-5p 2_......785
VMR_0803 prv-miR-8-5p 3_......885
VMR_0799 prv-miR-8-5p 3_......885
VMR_0797 prv-miR-8-5p 3_......885
VMR_0795 prv-miR-8-5p 2_......785
VMR_0780 prv-miR-7-5p 1......_685
VMR_0779 prv-miR-7-5p 2......_785
VMR_0778 prv-miR-7-5p 3......_885
VMR_0776 prv-miR-7-5p 1......_685
VMR_0775 prv-miR-7-5p 3......_885
VMR_0774 prv-miR-7-5p 2......_785
VMR_0772 prv-miR-7-5p 1......_685
VMR_0771 prv-miR-7-5p 2......_785
VMR_0770 prv-miR-7-5p 3......_885
VMR_0768 prv-miR-7-5p 1......_685
VMR_0767 prv-miR-7-5p 2......_785
VMR_0766 prv-miR-7-5p 2......_785
VMR_0765 prv-miR-7-5p 3......_885
VMR_0764 prv-miR-7-5p 2......_785
VMR_0763 prv-miR-7-5p 3......_885
VMR_0761 prv-miR-7-5p 3......_885
VMR_0844 prv-miR-9-3p 6......_185
VMR_0843 prv-miR-9-3p 8......_385
VMR_0840 prv-miR-9-3p 8......_385
VMR_0837 prv-miR-9-3p 8......_385
VMR_0438 mcmv-miR-m23-2 3_......885
VMR_0336 hsv2-miR-h5 3_......885
VMR_0036 bhv5-miR-b14 1......_685
VMR_0033 bhv5-miR-B11 2......_785