| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ctcgttaa | 8 | ||
| VMR_1120 | rrv-miR-rr1-4-5p | 1 | ........ | 8 | 100 |
| VMR_1118 | rrv-miR-rr1-4-5p | 1 | ........ | 8 | 100 |
| VMR_1117 | rrv-miR-rr1-4-3p | 1 | ........ | 8 | 100 |
| VMR_1116 | rrv-miR-rr1-4-3p | 1 | ........ | 8 | 100 |
| VMR_1115 | rrv-miR-rr1-4-3p | 1 | ........ | 8 | 100 |
| VMR_1114 | rrv-miR-rr1-4* | 1 | ........ | 8 | 100 |
