Result for your query miRNA sequence
>prv-miR-1-3p
cucucacc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ctctcacc8
VMR_1228 tumv-miR-s47 8........1100
VMR_0806 prv-miR-8-5p 8........1100
VMR_0801 prv-miR-8-5p 8........1100
VMR_0798 prv-miR-8-5p 8........1100
VMR_0654 prv-miR-1-3p 1........8100
VMR_0652 prv-miR-1-3p 1........8100
VMR_0823 prv-miR-8-5p 7......._187
VMR_0815 prv-miR-8-5p 7......._187
VMR_0811 prv-miR-8-5p 7......._187
VMR_0807 prv-miR-8-5p 7......._187
VMR_0805 prv-miR-8-5p 8_.......287
VMR_0656 prv-miR-1-3p 1_.......787
VMR_0655 prv-miR-1-3p 1_.......787
VMR_0653 prv-miR-1-3p 1_.......787
VMR_0651 prv-miR-1-3p 1_.......787
VMR_1238 tumv-miR-s56 3_......_875
VMR_0831 prv-miR-8-loop 6......__175
VMR_0830 prv-miR-8-loop 6......__175
VMR_0829 prv-miR-8-loop 6......__175
VMR_0828 prv-miR-8-loop 6......__175
VMR_0825 prv-miR-8-loop 6......__175
VMR_0824 prv-miR-8-loop 6......__175
VMR_0541 mghv-miR-m1-3 8__......375