Result for your query miRNA sequence
>hsv1-miR-h2
cugagcc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ctgagcc7
VMR_0325 hsv2-miR-h2 2.......8100
VMR_0303 hsv1-miR-h2-3p 2.......8100
VMR_0301 hsv1-miR-h2 2.......8100