| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ctgcctaa | 8 | ||
| VMR_1215 | tumv-miR-s35 | 1 | ........ | 8 | 100 |
| VMR_1171 | sgiv-miR-1-5p | 8 | .c...... | 1 | 87 |
| VMR_0444 | mcmv-miR-m87-1 | 6 | ......__ | 1 | 75 |
