| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gaagcac | 7 | ||
| VMR_1240 | tumv-miR-s58 | 2 | ....... | 8 | 100 |
| VMR_0976 | rlcv-miR-rl1-17-3p | 6 | ......_ | 1 | 85 |
| VMR_0565 | ohv2-miR-17-21 | 1 | _...... | 6 | 85 |
| VMR_0334 | hsv2-miR-h4-3p | 8 | _...... | 3 | 85 |
