| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gaatatgt | 8 | ||
| VMR_1159 | rrv-miR-rr1-9-5p | 1 | ........ | 8 | 100 |
| VMR_1162 | rrv-miR-rr1-9-5p | 1 | _....... | 7 | 87 |
| VMR_1161 | rrv-miR-rr1-9-5p | 1 | _....... | 7 | 87 |
| VMR_1160 | rrv-miR-rr1-9-5p | 1 | _....... | 7 | 87 |
| VMR_1158 | rrv-miR-rr1-9-5p | 1 | _....... | 7 | 87 |
| VMR_1204 | tumv-miR-s25 | 3 | _......_ | 8 | 75 |
| VMR_0570 | ohv2-miR-17-26 | 6 | ......__ | 1 | 75 |
