Result for your query miRNA sequence
>rrv-miR-rr1-11-5p
gacccagc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gacccagc8
VMR_1072 rrv-miR-rr1-11-5p 1........8100
VMR_0418 kshv-miR-k12-9* 1_.......787
VMR_1071 rrv-miR-rr1-11-3p 8......__375
VMR_1070 rrv-miR-rr1-11-3p 8......__375
VMR_1069 rrv-miR-rr1-11-3p 8......__375
VMR_0649 prv-miR-11-1 8__......375
VMR_0646 prv-miR-11-1 8__......375
VMR_0643 prv-miR-11-1 6__......175
VMR_0642 prv-miR-11-1 8__......375
VMR_0638 prv-miR-11-1 6__......175
VMR_0637 prv-miR-11-1 7__......275
VMR_0636 prv-miR-11-1 8__......375
VMR_0630 prv-miR-11-1 6__......175
VMR_0629 prv-miR-11-1 7__......275
VMR_0628 prv-miR-11-1 8__......375
VMR_0621 prv-miR-11-1 8__......375
VMR_0619 prv-miR-11-1 8__......375
VMR_0614 prv-miR-11-1 6__......175
VMR_0613 prv-miR-11-1 8__......375
VMR_0610 prv-miR-11-1 8__......375
VMR_0558 ohv2-miR-17-13 7......__275
VMR_0417 kshv-miR-k12-9 6_......_175