| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gagagca | 7 | ||
| VMR_1143 | rrv-miR-rr1-7-5p | 1 | ....... | 7 | 100 |
| VMR_1142 | rrv-miR-rr1-7-5p | 2 | ....... | 8 | 100 |
| VMR_1145 | rrv-miR-rr1-7-5p | 3 | ......_ | 8 | 85 |
| VMR_1144 | rrv-miR-rr1-7-5p | 3 | ......_ | 8 | 85 |
| VMR_1141 | rrv-miR-rr1-7-5p | 3 | ......_ | 8 | 85 |
| VMR_1140 | rrv-miR-rr1-7-5p | 3 | ......_ | 8 | 85 |
| VMR_1034 | rlcv-miR-rl1-33-3p | 3 | _...... | 8 | 85 |
| VMR_1033 | rlcv-miR-rl1-33-3p | 3 | _...... | 8 | 85 |
