| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gagttct | 7 | ||
| VMR_1257 | tumv-miR-s73 | 2 | ....... | 8 | 100 |
| VMR_1198 | tumv-miR-s2 | 3 | ......_ | 8 | 85 |
| VMR_0335 | hsv2-miR-h4-5p | 1 | ......_ | 6 | 85 |
| VMR_0182 | hbv-miR-b26-5p | 2 | ......_ | 7 | 85 |
| VMR_0183 | hbv-miR-b26-5p | 2 | ......_ | 7 | 85 |
