Result for your query miRNA sequence
>jcv-miR-j1-3p
gcuugau

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gcttgat7
VMR_0388 jcv-miR-j1-3p 2.......8100
VMR_0038 bkv-miR-b1-3p 2.......8100