| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ggaaggt | 7 | ||
| VMR_0053 | blv-miR-b5-5p | 2 | ....... | 8 | 100 |
| VMR_1019 | rlcv-miR-rl1-28-5p | 2 | ......_ | 7 | 85 |
| VMR_1020 | rlcv-miR-rl1-28-5p | 2 | ......_ | 7 | 85 |
| VMR_0380 | iltv-miR-i2 | 1 | ......_ | 6 | 85 |
