| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ggacaccc | 8 | ||
| VMR_0906 | rcmv-miR-r111.2-3 | 1 | ........ | 8 | 100 |
| VMR_1300 | wssv-miR68 | 2 | ......__ | 7 | 75 |
| VMR_1285 | wssv-miR197 | 2 | __...... | 7 | 75 |
| VMR_1259 | tumv-miR-s75 | 3 | _......_ | 8 | 75 |
| VMR_0291 | hsv1-miR-h1* | 2 | __...... | 7 | 75 |
