| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ggatggg | 7 | ||
| VMR_0777 | prv-miR-7-5p | 2 | ....... | 8 | 100 |
| VMR_0773 | prv-miR-7-5p | 2 | ....... | 8 | 100 |
| VMR_0769 | prv-miR-7-5p | 2 | ....... | 8 | 100 |
| VMR_0742 | prv-miR-5-5p | 2 | ......_ | 7 | 85 |
| VMR_0737 | prv-miR-5-5p | 1 | ......_ | 6 | 85 |
| VMR_0736 | prv-miR-5-5p | 3 | ......_ | 8 | 85 |
| VMR_0338 | hsv2-miR-h6* | 6 | _...... | 1 | 85 |
| VMR_0257 | hhv6b-miR-ro6-4* | 2 | ......_ | 7 | 85 |
| VMR_0231 | hcmv-miR-ul70-3p | 3 | ......_ | 8 | 85 |
| VMR_0074 | dev-miR-d18-3p | 6 | ......_ | 1 | 85 |
