| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gtcatct | 7 | ||
| VMR_0087 | dev-miR-d5-5p | 2 | ....... | 8 | 100 |
| VMR_1155 | rrv-miR-rr1-9-3p | 3 | ......_ | 8 | 85 |
| VMR_0982 | rlcv-miR-rl1-18-5p | 7 | _...... | 2 | 85 |
| VMR_0981 | rlcv-miR-rl1-18-5p | 7 | _...... | 2 | 85 |
| VMR_0980 | rlcv-miR-rl1-18-5p | 7 | _...... | 2 | 85 |
| VMR_0635 | prv-miR-11-1 | 6 | _...... | 1 | 85 |
| VMR_0626 | prv-miR-11-1 | 6 | _...... | 1 | 85 |
