| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gtgtttt | 7 | ||
| VMR_0489 | mdv2-miR-m15 | 2 | ....... | 8 | 100 |
| VMR_1242 | tumv-miR-s6 | 6 | _...... | 1 | 85 |
| VMR_1112 | rrv-miR-rr1-3-5p | 1 | ......_ | 6 | 85 |
| VMR_1111 | rrv-miR-rr1-3-5p | 1 | ......_ | 6 | 85 |
| VMR_0496 | mdv2-miR-m18-5p | 1 | _...... | 6 | 85 |
| VMR_0071 | dev-miR-d16-3p | 8 | ......_ | 3 | 85 |
