| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gtttcag | 7 | ||
| VMR_0234 | hcmv-miR-us22-5p6 | 2 | ....... | 8 | 100 |
| VMR_0974 | rlcv-miR-rl1-16-3p | 8 | ......_ | 3 | 85 |
| VMR_0547 | mghv-miR-m1-6 | 6 | ......_ | 1 | 85 |
