| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tacaact | 7 | ||
| VMR_1294 | wssv-miR45 | 2 | ....... | 8 | 100 |
| VMR_1292 | wssv-miR36-3p | 7 | _...... | 2 | 85 |
| VMR_0998 | rlcv-miR-rl1-23-3p | 8 | _...... | 3 | 85 |
| VMR_0463 | mdv1-miR-m2-5p | 6 | ......_ | 1 | 85 |
| VMR_0119 | ebv-miR-bart21-3p | 8 | _...... | 3 | 85 |
