| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tacacca | 7 | ||
| VMR_1167 | sgiv-miR-12 | 2 | ....... | 8 | 100 |
| VMR_1285 | wssv-miR197 | 1 | ......_ | 6 | 85 |
| VMR_1273 | wssv-miR129 | 7 | _...... | 2 | 85 |
| VMR_1013 | rlcv-miR-rl1-26-5p | 3 | ......_ | 8 | 85 |
| VMR_0532 | mghv-miR-m1-12 | 8 | _...... | 3 | 85 |
| VMR_0396 | kshv-miR-k12-10b | 6 | _...... | 1 | 85 |
| VMR_0391 | kshv-miR-k10b_+1_5 | 7 | _...... | 2 | 85 |
| VMR_0291 | hsv1-miR-h1* | 1 | ......_ | 6 | 85 |
