| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tacagttt | 8 | ||
| VMR_0091 | dev-miR-d8-3p | 1 | ........ | 8 | 100 |
| VMR_0401 | kshv-miR-k12-2 | 7 | ......._ | 1 | 87 |
| VMR_0252 | hhv6b-miR-ro6-2 | 2 | ......._ | 8 | 87 |
| VMR_1223 | tumv-miR-s42 | 6 | _......_ | 1 | 75 |
| VMR_0579 | ohv2-miR-2 | 7 | ......__ | 2 | 75 |
| VMR_0561 | ohv2-miR-17-16 | 7 | __...... | 2 | 75 |
| VMR_0547 | mghv-miR-m1-6 | 8 | __...... | 3 | 75 |
