Result for your query miRNA sequence
>hcmv-miR-us33-3p
ucacgguc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tcacggtc8
VMR_0241 hcmv-miR-us33-3p 1........8100
VMR_0948 rhcmv-miR-rh183-2 2__......775
VMR_0347 hvsa-miR-hsur4-5p 6_......_175
VMR_0274 hsv1-miR-107969 1......__675
VMR_0239 hcmv-miR-us29-3p6 3_......_875