| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tcccctg | 7 | ||
| VMR_0249 | hcv-miR-199a* | 2 | ....... | 8 | 100 |
| VMR_0434 | mcmv-miR-m21-1 | 8 | ......_ | 3 | 85 |
| VMR_0178 | hbv-miR-b22-3p | 7 | ......_ | 2 | 85 |
| VMR_0177 | hbv-miR-b22-3p | 7 | ......_ | 2 | 85 |
