Result for your query miRNA sequence
>rcmv-miR-r6-1
ucccgucc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tcccgtcc8
VMR_0927 rcmv-miR-r6-1 1........8100
VMR_0624 prv-miR-11-1 8.t......187
VMR_0880 rcmv-miR-orilyt-1 6_......_175
VMR_0879 rcmv-miR-orilyt-1 6_......_175
VMR_0680 prv-miR-2-5p 1_......_675
VMR_0639 prv-miR-11-1 7__......275
VMR_0632 prv-miR-11-1 7__......275
VMR_0623 prv-miR-11-1 7__......275
VMR_0615 prv-miR-11-1 8__......375
VMR_0274 hsv1-miR-107969 8......__375
VMR_0146 ebv-miR-bhrf1-3 8......__375