VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>mcmv-miR-m23-1-5p
ucgguac

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tcggtac`	7
VMR_0749	prv-miR-6-5p	8	`.......`	2	100
VMR_0752	prv-miR-6-5p	8	`.......`	2	100
VMR_0751	prv-miR-6-5p	8	`.......`	2	100
VMR_0750	prv-miR-6-5p	8	`.......`	2	100
VMR_0748	prv-miR-6-5p	8	`.......`	2	100
VMR_0747	prv-miR-6-5p	8	`.......`	2	100
VMR_0437	mcmv-miR-m23-1-5p	2	`.......`	8	100
VMR_0256	hhv6b-miR-ro6-4	7	`......_`	2	85

Copyright © 2013 Bioinformatics center, CSIR-IMTECH, Chandigarh 160036, India

Links: CRDD | OSDD | CSIR | IMTECH | BIC