| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tctgtatc | 8 | ||
| VMR_0581 | ohv2-miR-3 | 1 | ........ | 8 | 100 |
| VMR_0474 | mdv1-miR-m5-3p | 1 | .g...... | 8 | 87 |
| VMR_0472 | mdv1-miR-m5 | 1 | .g...... | 8 | 87 |
| VMR_1308 | wssv-miR99-5p | 6 | ......__ | 1 | 75 |
| VMR_1307 | wssv-miR99-3p | 6 | ......__ | 1 | 75 |
