| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tgagaga | 7 | ||
| VMR_0831 | prv-miR-8-loop | 1 | ....... | 7 | 100 |
| VMR_0830 | prv-miR-8-loop | 1 | ....... | 7 | 100 |
| VMR_0829 | prv-miR-8-loop | 1 | ....... | 7 | 100 |
| VMR_0828 | prv-miR-8-loop | 1 | ....... | 7 | 100 |
| VMR_0825 | prv-miR-8-loop | 1 | ....... | 7 | 100 |
| VMR_0824 | prv-miR-8-loop | 1 | ....... | 7 | 100 |
| VMR_0823 | prv-miR-8-5p | 2 | ....... | 8 | 100 |
| VMR_0815 | prv-miR-8-5p | 2 | ....... | 8 | 100 |
| VMR_0811 | prv-miR-8-5p | 2 | ....... | 8 | 100 |
| VMR_0807 | prv-miR-8-5p | 2 | ....... | 8 | 100 |
| VMR_1228 | tumv-miR-s47 | 3 | ......_ | 8 | 85 |
| VMR_0915 | rcmv-miR-r1-2 | 8 | _...... | 3 | 85 |
| VMR_0914 | rcmv-miR-r1-2 | 8 | _...... | 3 | 85 |
| VMR_0826 | prv-miR-8-loop | 1 | _...... | 6 | 85 |
| VMR_0806 | prv-miR-8-5p | 3 | ......_ | 8 | 85 |
| VMR_0801 | prv-miR-8-5p | 3 | ......_ | 8 | 85 |
| VMR_0798 | prv-miR-8-5p | 3 | ......_ | 8 | 85 |
| VMR_0654 | prv-miR-1-3p | 6 | ......_ | 1 | 85 |
| VMR_0652 | prv-miR-1-3p | 6 | ......_ | 1 | 85 |
| VMR_0375 | hvt-miR-h8 | 7 | _...... | 2 | 85 |
| VMR_0261 | hiv1-miR-tar-5p | 6 | _...... | 1 | 85 |
| VMR_0229 | hcmv-miR-ul59-5p | 8 | _...... | 3 | 85 |
