| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tgggccg | 7 | ||
| VMR_0131 | ebv-miR-bart5* | 2 | ....... | 8 | 100 |
| VMR_1063 | rlcv-miR-rl1-8-3p | 3 | ......_ | 8 | 85 |
| VMR_1062 | rlcv-miR-rl1-8-3p | 3 | ......_ | 8 | 85 |
| VMR_1060 | rlcv-miR-rl1-7-3p | 3 | ......_ | 8 | 85 |
| VMR_1059 | rlcv-miR-rl1-7-3p | 3 | ......_ | 8 | 85 |
| VMR_0200 | hbv-miR-b7-5p | 3 | ......_ | 8 | 85 |
| VMR_0199 | hbv-miR-b7-5p | 3 | ......_ | 8 | 85 |
| VMR_0196 | hbv-miR-b7-5p | 3 | ......_ | 8 | 85 |
| VMR_0184 | hbv-miR-b2rc | 7 | _...... | 2 | 85 |
