| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tggtttgc | 8 | ||
| VMR_0556 | ohv2-miR-17-11 | 1 | ........ | 8 | 100 |
| VMR_0079 | dev-miR-d21-5p | 1 | ......._ | 7 | 87 |
| VMR_0270 | hpv6-miR-h1 | 1 | ......t. | 8 | 87 |
| VMR_1110 | rrv-miR-rr1-3-3p | 3 | _......_ | 8 | 75 |
| VMR_0546 | mghv-miR-m1-5* | 8 | __...... | 3 | 75 |
| VMR_0365 | hvt-miR-h18-5p | 8 | _......_ | 3 | 75 |
