| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tggttttc | 8 | ||
| VMR_0270 | hpv6-miR-h1 | 1 | ........ | 8 | 100 |
| VMR_0556 | ohv2-miR-17-11 | 1 | ......g. | 8 | 87 |
| VMR_0497 | mdv2-miR-m18-5p_-1_5 | 1 | __...... | 6 | 75 |
| VMR_0496 | mdv2-miR-m18-5p | 2 | __...... | 7 | 75 |
| VMR_0079 | dev-miR-d21-5p | 1 | ......__ | 6 | 75 |
| VMR_0056 | bmnpv-miR-2 | 3 | _......_ | 8 | 75 |
