| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ttacaact | 8 | ||
| VMR_1294 | wssv-miR45 | 1 | ........ | 8 | 100 |
| VMR_1292 | wssv-miR36-3p | 7 | __...... | 2 | 75 |
| VMR_0998 | rlcv-miR-rl1-23-3p | 8 | __...... | 3 | 75 |
| VMR_0463 | mdv1-miR-m2-5p | 6 | _......_ | 1 | 75 |
| VMR_0121 | ebv-miR-bart22 | 1 | ......__ | 6 | 75 |
| VMR_0119 | ebv-miR-bart21-3p | 8 | __...... | 3 | 75 |
