| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ttgcagtg | 8 | ||
| VMR_1236 | tumv-miR-s54 | 1 | ........ | 8 | 100 |
| VMR_1087 | rrv-miR-rr1-13-5p | 2 | ......._ | 8 | 87 |
| VMR_1266 | tumv-miR-s81 | 3 | ......__ | 8 | 75 |
| VMR_1086 | rrv-miR-rr1-13-5p | 3 | ......__ | 8 | 75 |
| VMR_0952 | rhcmv-miR-rh96-1 | 1 | __...... | 6 | 75 |
