| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ttgcgtg | 7 | ||
| VMR_1272 | wssv-miR126 | 2 | ....... | 8 | 100 |
| VMR_1237 | tumv-miR-s55 | 1 | _...... | 6 | 85 |
| VMR_0042 | blv-miR-b2-3p | 1 | _...... | 6 | 85 |
| VMR_0043 | blv-miR-b2-3p | 1 | _...... | 6 | 85 |
