| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ttggatc | 7 | ||
| VMR_0316 | hsv1-miR-h7* | 2 | ....... | 8 | 100 |
| VMR_0988 | rlcv-miR-rl1-20-3p | 3 | _...... | 8 | 85 |
| VMR_0339 | hsv2-miR-h7-3p | 2 | ......_ | 7 | 85 |
