| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tttagtg | 7 | ||
| VMR_1058 | rlcv-miR-rl1-6-5p | 2 | ....... | 8 | 100 |
| VMR_0390 | kshv-miR-k10a_+1_5 | 1 | _...... | 6 | 85 |
| VMR_0108 | ebv-miR-bart1-5p | 3 | _...... | 8 | 85 |
| VMR_0095 | ebv-miR-bart1 | 3 | _...... | 8 | 85 |
