| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tttcctt | 7 | ||
| VMR_0456 | mdv1-miR-m11-5p | 2 | ....... | 8 | 100 |
| VMR_1281 | wssv-miR164 | 2 | _...... | 7 | 85 |
| VMR_1201 | tumv-miR-s22 | 3 | _...... | 8 | 85 |
| VMR_1018 | rlcv-miR-rl1-28-3p | 7 | ......_ | 2 | 85 |
| VMR_0374 | hvt-miR-h7-5p | 3 | ......_ | 8 | 85 |
