| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ttttgttt | 8 | ||
| VMR_1021 | rlcv-miR-rl1-29-3p | 1 | ........ | 8 | 100 |
| VMR_0114 | ebv-miR-bart19-3p | 1 | ........ | 8 | 100 |
| VMR_1298 | wssv-miR5-5p | 3 | ......__ | 8 | 75 |
| VMR_1261 | tumv-miR-s77 | 2 | _......_ | 7 | 75 |
| VMR_1175 | sgiv-miR-5 | 6 | __...... | 1 | 75 |
