| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | aaatagc | 7 | ||
| MIMAT0036712 | oha-miR-138-2-3p | 7 | ....... | 1 | 100 |
| MIMAT0032353 | ssa-miR-138-3p | 7 | ....... | 1 | 100 |
| MIMAT0022387 | ath-miR5628 | 2 | ....... | 8 | 100 |
| MIMAT0021758 | aca-miR-138-1-3p | 7 | ....... | 1 | 100 |
| MIMAT0031021 | tgu-miR-138-2-3p | 7 | ....... | 1 | 100 |
| MIMAT0012871 | hvt-miR-H16-3p | 2 | ....... | 8 | 100 |
| MIMAT0009817 | nve-miR-2046-3p | 2 | ....... | 8 | 100 |
| MIMAT0007220 | oan-miR-138-3p | 7 | ....... | 1 | 100 |
| MIMAT0031973 | dre-miR-138-3p | 7 | ....... | 1 | 100 |
| MIMAT0017127 | rno-miR-138-2-3p | 7 | ....... | 1 | 100 |
| MIMAT0004596 | hsa-miR-138-2-3p | 7 | ....... | 1 | 100 |
| MIMAT0020336 | cel-miR-245-5p | 7 | ....... | 1 | 100 |
| MIMAT0016987 | mmu-miR-138-2-3p | 7 | ....... | 1 | 100 |
| MIMAT0035414 | nve-miR-9453 | 8 | _...... | 3 | 85 |
| MIMAT0033906 | atr-miR8614 | 2 | _...... | 7 | 85 |
| MIMAT0033829 | atr-miR8557 | 3 | ......_ | 8 | 85 |
| MIMAT0033649 | sma-miR-8465-5p | 3 | _...... | 8 | 85 |
| MIMAT0033242 | ppc-miR-8347-5p | 8 | _...... | 3 | 85 |
| MIMAT0032961 | ppc-miR-8248-3p | 1 | _...... | 6 | 85 |
| MIMAT0030275 | bdi-miR7764-3p | 1 | ......_ | 6 | 85 |
| MIMAT0030204 | bdi-miR7717c-5p | 8 | _...... | 3 | 85 |
| MIMAT0030169 | bdi-miR7717b-3p | 8 | ......_ | 3 | 85 |
| MIMAT0030020 | hsa-miR-7705 | 1 | _...... | 6 | 85 |
| MIMAT0028875 | mdo-miR-7388c-3p | 1 | ......_ | 6 | 85 |
| MIMAT0028672 | mdo-miR-7332-5p | 2 | _...... | 7 | 85 |
| MIMAT0025265 | ptc-miR6455 | 3 | ......_ | 8 | 85 |
| MIMAT0023020 | bra-miR5722 | 3 | ......_ | 8 | 85 |
| MIMAT0022110 | pti-miR5477 | 3 | ......_ | 8 | 85 |
| MIMAT0021575 | asu-miR-5356b-3p | 8 | ......_ | 3 | 85 |
| MIMAT0016578 | cin-miR-4044-3p | 3 | ......_ | 8 | 85 |
| MIMAT0016473 | cin-miR-4006b-3p | 6 | _...... | 1 | 85 |
| MIMAT0015643 | mmu-miR-3472 | 2 | _...... | 7 | 85 |
| MIMAT0014671 | hma-miR-3004 | 8 | ......_ | 3 | 85 |
| MIMAT0014426 | cqu-miR-31-3p | 7 | _...... | 2 | 85 |
| MIMAT0012733 | mdv2-miR-M32-3p | 2 | _...... | 7 | 85 |
| MIMAT0012329 | dps-miR-2537-3p | 1 | ......_ | 6 | 85 |
| MIMAT0012308 | dps-miR-2520 | 1 | _...... | 6 | 85 |
| MIMAT0011896 | bta-miR-2358 | 3 | ......_ | 8 | 85 |
| MIMAT0013779 | sme-miR-31b-3p | 7 | _...... | 2 | 85 |
| MIMAT0009828 | nve-miR-2051-5p | 1 | ......_ | 6 | 85 |
| MIMAT0005259 | smo-miR1102 | 7 | _...... | 2 | 85 |
| MIMAT0011413 | sme-miR-31b-1-3p | 8 | _...... | 3 | 85 |
