Result for your query miRNA sequence
>kshv-miR-k12-12*
aaccaggc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1aaccaggc8
MIMAT0012491dsi-miR-992-5p8........1100
MIMAT0007369gma-miR15111........8100
MIMAT0003712kshv-miR-K12-12-5p1........8100
MIMAT0034654eca-miR-70358......._287
MIMAT0034478eca-miR-89492......._887
MIMAT0033321str-miR-7880f-5p8_.......287
MIMAT0029653cbn-miR-75972......._887
MIMAT0029612crm-miR-75972......._887
MIMAT0029582cbr-miR-75812......._887
MIMAT0028375mml-miR-1911-3p1_.......787
MIMAT0021497asu-miR-133-5p7......._187
MIMAT0019705hsa-miR-4645-5p1_.......787
MIMAT0014796api-miR-3045b7_.......187
MIMAT0007886hsa-miR-1911-3p2_.......887
MIMAT0037040ssc-miR-9822-3p8.t......187
MIMAT0037039ssc-miR-9821-5p8.t......187
MIMAT0033378str-miR-7880q-5p8......c.187
MIMAT0024802hvu-miR61791......t.887
MIMAT0024624mml-miR-61318......c.187
MIMAT0019896hsa-miR-4755-3p1.g......887
MIMAT0014068csi-miR1608.g......187
MIMAT0010001bfl-miR-20738.c......187
MIMAT0007593gga-miR-17018......c.187
MIMAT0037200ata-miR160c-5p7__......275
MIMAT0037156ata-miR160a-5p7__......275
MIMAT0037102ata-miR160b-5p7__......275
MIMAT0037065ssc-miR-9846-3p7__......275
MIMAT0036880oha-miR-29b-2-5p6......__175
MIMAT0036878oha-miR-29b-1-5p6......__175
MIMAT0036114chi-miR-29b-5p6......__175
MIMAT0035511bdi-miR160f7__......275
MIMAT0035505bdi-miR94966......__175
MIMAT0035415nve-miR-94542_......_775
MIMAT0035079efu-miR-93311__......675
MIMAT0034853efu-miR-9237a2__......775
MIMAT0034772efu-miR-91927......__275
MIMAT0034507eca-miR-89706__......175
MIMAT0034392cfa-miR-88888......__375
MIMAT0034290cfa-miR-88008__......375
MIMAT0033912atr-miR1607__......275
MIMAT0033478str-miR-7880x-5p8__......375
MIMAT0033093ppc-miR-8290-5p7......__275
MIMAT0032914ppc-miR-133-5p7......__275
MIMAT0032583ssa-miR-29a-5p6......__175
MIMAT0031800cpa-miR166e3_......_875
MIMAT0031789cpa-miR160f-5p7__......275
MIMAT0031788cpa-miR160e7__......275
MIMAT0031787cpa-miR160d7__......275
MIMAT0031785cpa-miR160c-5p7__......275
MIMAT0031784cpa-miR160b7__......275
MIMAT0031783cpa-miR160a7__......275
MIMAT0031664bbe-miR-29b-5p7......__275
MIMAT0031620bbe-miR-2060b-3p3_......_875
MIMAT0031439ppe-miR160b7__......275
MIMAT0031438ppe-miR160a7__......275
MIMAT0031285stu-miR160b7__......275
MIMAT0031283stu-miR160a-5p7__......275
MIMAT0030656prd-miR-87-5p7__......275
MIMAT0029809mmu-miR-7036b-3p8_......_375
MIMAT0029492ipu-miR-29c6......__175
MIMAT0029186mes-miR160h7__......275
MIMAT0029185mes-miR160g7__......275
MIMAT0029184mes-miR160f7__......275
MIMAT0029183mes-miR160e7__......275
MIMAT0029182mes-miR160d7__......275
MIMAT0029181mes-miR160c7__......275
MIMAT0029180mes-miR160b7__......275
MIMAT0029179mes-miR160a7__......275
MIMAT0028727mdo-miR-7357-3p1__......675
MIMAT0028528mdo-miR-7277-5p7_......_275
MIMAT0031047mdo-miR-29b-2-5p7......__275
MIMAT0026180cme-miR160c7__......275
MIMAT0026178cme-miR160d7__......275
MIMAT0026171cme-miR160b7__......275
MIMAT0026072cme-miR160a7__......275
MIMAT0025904mdm-miR160e7__......275
MIMAT0025903mdm-miR160d7__......275
MIMAT0025902mdm-miR160c7__......275
MIMAT0025901mdm-miR160b7__......275
MIMAT0025900mdm-miR160a7__......275
MIMAT0028040mmu-miR-6769b-5p6_......_175
MIMAT0028006mmu-miR-7051-5p3_......_875
MIMAT0027576hsa-miR-6837-5p1_......_675
MIMAT0027406hsa-miR-6753-5p2_......_775
MIMAT0025812gga-miR-6702-5p2_......_775
MIMAT0025751gga-miR-6651-5p1_......_675
MIMAT0025628gga-miR-6560-3p2_......_775
MIMAT0025499htu-miR160a7__......275
MIMAT0025081mmu-miR-63386......__175
MIMAT0025075rno-miR-63341__......675
MIMAT0025055rno-miR-63188__......375
MIMAT0024888gma-miR160f7__......275
MIMAT0024643nta-miR160d7__......275
MIMAT0024642nta-miR160c7__......275
MIMAT0024641nta-miR160b7__......275
MIMAT0024640nta-miR160a7__......275
MIMAT0027225lus-miR160j7__......275
MIMAT0027222lus-miR160i7__......275
MIMAT0027211lus-miR160h7__......275
MIMAT0027202lus-miR160g7__......275
MIMAT0027195lus-miR160f7__......275
MIMAT0027189lus-miR160e7__......275
MIMAT0027171lus-miR160d7__......275
MIMAT0027151lus-miR160c7__......275
MIMAT0027150lus-miR160b7__......275
MIMAT0027137lus-miR160a7__......275
MIMAT0024514cca-miR160b7__......275
MIMAT0024513cca-miR160a7__......275
MIMAT0023885cgr-miR-29b-5p7......__275
MIMAT0023653bna-miR60333......__875
MIMAT0023620bna-miR160d7__......275
MIMAT0023619bna-miR160c7__......275
MIMAT0023618bna-miR160b7__......275
MIMAT0023617bna-miR160a7__......275
MIMAT0023528dpr-miR1607__......275
MIMAT0022755vun-miR1607__......275
MIMAT0021513asu-miR-279b-5p7......__275
MIMAT0021483asu-miR-87b-5p7__......275
MIMAT0027079bdi-miR166g-5p7......__275
MIMAT0020682bdi-miR160e-5p7__......275
MIMAT0020681bdi-miR160d-5p7__......275
MIMAT0020675bdi-miR160c-5p7__......275
MIMAT0020668bdi-miR160b-5p7__......275
MIMAT0020661bdi-miR160a-5p7__......275
MIMAT0020560bdi-miR50598__......375
MIMAT0020973gma-miR160e7__......275
MIMAT0020972gma-miR160d7__......275
MIMAT0020971gma-miR160c7__......275
MIMAT0020970gma-miR160b7__......275
MIMAT0020210dme-miR-4978-5p6__......175
MIMAT0020206dme-miR-4976-5p2__......775
MIMAT0020378tcc-miR160c7__......275
MIMAT0020377tcc-miR160b7__......275
MIMAT0020376tcc-miR160a7__......275
MIMAT0019858hsa-miR-4733-3p3_......_875
MIMAT0019755hsa-miR-46732__......775
MIMAT0019479pma-miR-146-3p7__......275
MIMAT0019447pma-miR-125-3p7......__275
MIMAT0019420pma-miR-29d-5p6......__175
MIMAT0019012hsa-miR-3155b1__......675
MIMAT0018978hsa-miR-44566_......_175
MIMAT0018363far-miR1607__......275
MIMAT0018212ttu-miR1607__......275
MIMAT0018147pab-miR160b7__......275
MIMAT0018146pab-miR160a7__......275
MIMAT0016884hsa-miR-42546__......175
MIMAT0016703cin-miR-4113-5p7......__275
MIMAT0016570cin-miR-4040-3p2......__775
MIMAT0016398cin-miR-15-3p6......__175
MIMAT0016322ahy-miR160-5p7__......275
MIMAT0017792esi-miR3465-3p7_......_275
MIMAT0017439aly-miR160c-5p7__......275
MIMAT0017437aly-miR160b-5p7__......275
MIMAT0017435aly-miR160a-5p7__......275
MIMAT0015521bmo-miR-33343......__875
MIMAT0015029hsa-miR-3155a1__......675
MIMAT0014978hsa-miR-31167__......275
MIMAT0014794api-miR-3015c1......__675
MIMAT0031064tgu-miR-29b-1-5p6......__175
MIMAT0014206rco-miR160c7__......275
MIMAT0014154rco-miR160b7__......275
MIMAT0014153rco-miR160a7__......275
MIMAT0013981zma-miR160g-5p7__......275
MIMAT0012844rno-miR-6651_......_675
MIMAT0012814ptr-miR-6617__......275
MIMAT0012786mml-miR-6651_......_675
MIMAT0012554aqc-miR160b7__......275
MIMAT0012553aqc-miR160a7__......275
MIMAT0012402dps-miR-2567b-5p1_......_675
MIMAT0012396dps-miR-2567a-5p1_......_675
MIMAT0011979bta-miR-2415-3p1__......675
MIMAT0011700ppc-miR-22651......__675
MIMAT0011613crm-miR-35c-5p8......__375
MIMAT0011600crm-lin-4-3p8__......375
MIMAT0011324sbi-miR160f7__......275
MIMAT0010154bra-miR160a-5p7__......275
MIMAT0019178tca-bantam-5p6......__175
MIMAT0009934cfa-miR-6651_......_675
MIMAT0009579lgi-miR-133-5p8......__375
MIMAT0019140bfl-miR-29b-5p7......__275
MIMAT0019116tca-miR-133-5p8......__375
MIMAT0008312ptr-miR-6651_......_675
MIMAT0008291ptr-miR-6341......__675
MIMAT0007979ptr-miR-12547__......275
MIMAT0007914sly-miR160a7__......275
MIMAT0015278bmo-bantam-5p6......__175
MIMAT0006500mml-miR-6617__......275
MIMAT0031079mml-miR-29b-2-5p8......__375
MIMAT0026803mml-miR-29b-1-5p8......__375
MIMAT0015255cin-miR-92c-5p8__......375
MIMAT0007091oan-miR-150-3p6_......_175
MIMAT0006808oan-miR-29b-5p6......__175
MIMAT0005656vvi-miR160e7__......275
MIMAT0005654vvi-miR160d7__......275
MIMAT0005653vvi-miR160c7__......275
MIMAT0005652vvi-miR160b7__......275
MIMAT0005651vvi-miR160a7__......275
MIMAT0005905hsa-miR-12547__......275
MIMAT0005407cre-miR1157-5p7_......_275
MIMAT0005345tae-miR1607__......275
MIMAT0005234smo-miR10838__......375
MIMAT0005219smo-miR160b7__......275
MIMAT0005218smo-miR160a7__......275
MIMAT0005110ppt-miR1024b7......__275
MIMAT0005109ppt-miR1024a7......__275
MIMAT0005038ppt-miR160i7__......275
MIMAT0005037ppt-miR160h7__......275
MIMAT0005036ppt-miR160g7__......275
MIMAT0005035ppt-miR160f7__......275
MIMAT0005034ppt-miR160e7__......275
MIMAT0004350ppt-miR160d7__......275
MIMAT0004349ppt-miR160c7__......275
MIMAT0004348ppt-miR160b7__......275
MIMAT0004347ppt-miR160a7__......275
MIMAT0011115mtr-miR160e7__......275
MIMAT0011101mtr-miR160d7__......275
MIMAT0011062mtr-miR160c7__......275
MIMAT0011060mtr-miR160b7__......275
MIMAT0004952hsa-miR-6651_......_675
MIMAT0026703mdo-miR-29b-1-5p7......__275
MIMAT0003733mmu-miR-665-3p1_......_675
MIMAT0003324hsa-miR-6617__......275
MIMAT0003304hsa-miR-6341......__675
MIMAT0004760mmu-miR-470-3p1......__675
MIMAT0001914ptc-miR160h7__......275
MIMAT0001913ptc-miR160g7__......275
MIMAT0001912ptc-miR160f7__......275
MIMAT0001911ptc-miR160e-5p7__......275
MIMAT0001910ptc-miR160d7__......275
MIMAT0001909ptc-miR160c-5p7__......275
MIMAT0001908ptc-miR160b-5p7__......275
MIMAT0001907ptc-miR160a7__......275
MIMAT0001750zma-miR160f-5p7__......275
MIMAT0001676gma-miR160a-5p7__......275
MIMAT0001641mtr-miR160a7__......275
MIMAT0001405sbi-miR160e7__......275
MIMAT0001404sbi-miR160b7__......275
MIMAT0001403sbi-miR160c7__......275
MIMAT0001402sbi-miR160a7__......275
MIMAT0001401sbi-miR160d7__......275
MIMAT0001374zma-miR160e7__......275
MIMAT0001363zma-miR160b-5p7__......275
MIMAT0001362zma-miR160d-5p7__......275
MIMAT0001361zma-miR160c-5p7__......275
MIMAT0001360zma-miR160a-5p7__......275
MIMAT0031072gga-miR-29b-2-5p8......__375
MIMAT0026488gga-miR-29b-1-5p8......__375
MIMAT0001031osa-miR160f-5p7__......275
MIMAT0001030osa-miR160e-5p7__......275
MIMAT0004717rno-miR-29b-5p6......__175
MIMAT0017063mmu-miR-29b-2-5p6......__175
MIMAT0000631osa-miR160d-5p7__......275
MIMAT0000630osa-miR160c-5p7__......275
MIMAT0000629osa-miR160b-5p7__......275
MIMAT0000628osa-miR160a-5p7__......275
MIMAT0020806dme-miR-133-5p8......__375
MIMAT0000180ath-miR160c-5p7__......275
MIMAT0000179ath-miR160b7__......275
MIMAT0000178ath-miR160a-5p7__......275
MIMAT0004523mmu-miR-29b-1-5p7......__275
MIMAT0004515hsa-miR-29b-2-5p6......__175
MIMAT0004514hsa-miR-29b-1-5p7......__275
MIMAT0020303cel-miR-35-5p8......__375