RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | aagaggca | 8 | ||
MIMAT0027827 | mmu-miR-6963-3p | 8 | ........ | 1 | 100 |
MIMAT0027463 | hsa-miR-6781-3p | 8 | ........ | 1 | 100 |
MIMAT0036809 | oha-miR-202-3p | 1 | _....... | 7 | 87 |
MIMAT0036081 | chi-miR-2290 | 8 | _....... | 2 | 87 |
MIMAT0034376 | cfa-miR-8876 | 8 | _....... | 2 | 87 |
MIMAT0034367 | cfa-miR-8870 | 7 | _....... | 1 | 87 |
MIMAT0032482 | ssa-miR-202-5p | 2 | ......._ | 8 | 87 |
MIMAT0032284 | ssa-miR-103-5p | 8 | ......._ | 2 | 87 |
MIMAT0025666 | gga-miR-6579-3p | 1 | _....... | 7 | 87 |
MIMAT0027329 | ppe-miR6293 | 2 | ......._ | 8 | 87 |
MIMAT0023666 | ame-miR-6044 | 1 | ......._ | 7 | 87 |
MIMAT0021850 | aca-miR-202-3p.1 | 1 | _....... | 7 | 87 |
MIMAT0019442 | pma-miR-103b-5p | 8 | ......._ | 2 | 87 |
MIMAT0013518 | hsa-miR-2682-3p | 8 | ......._ | 2 | 87 |
MIMAT0005252 | smo-miR1096 | 8 | _....... | 2 | 87 |
MIMAT0003355 | gga-miR-202-3p | 1 | _....... | 7 | 87 |
MIMAT0003074 | tni-miR-202 | 1 | _....... | 7 | 87 |
MIMAT0003073 | fru-miR-202 | 1 | _....... | 7 | 87 |
MIMAT0001864 | dre-miR-202-3p | 1 | _....... | 7 | 87 |
MIMAT0027559 | hsa-miR-6829-3p | 8 | .g...... | 1 | 87 |
MIMAT0027483 | hsa-miR-6791-3p | 8 | .g...... | 1 | 87 |
MIMAT0024297 | ggo-miR-202 | 1 | ......t. | 8 | 87 |
MIMAT0024258 | ggo-miR-3612 | 1 | .g...... | 8 | 87 |
MIMAT0022367 | mmu-miR-5620-5p | 1 | .c...... | 8 | 87 |
MIMAT0018190 | hsa-miR-3916 | 1 | ......a. | 8 | 87 |
MIMAT0017989 | hsa-miR-3612 | 1 | .g...... | 8 | 87 |
MIMAT0016083 | ppy-miR-650 | 1 | .g...... | 8 | 87 |
MIMAT0008301 | ptr-miR-650 | 1 | .g...... | 8 | 87 |
MIMAT0006490 | mml-miR-650c | 1 | .g...... | 8 | 87 |
MIMAT0006489 | mml-miR-650b | 1 | .g...... | 8 | 87 |
MIMAT0006488 | mml-miR-650a | 1 | .g...... | 8 | 87 |
MIMAT0003320 | hsa-miR-650 | 1 | .g...... | 8 | 87 |
MIMAT0036897 | oha-miR-31-5p | 2 | __...... | 7 | 75 |
MIMAT0036301 | chi-miR-877-3p | 7 | ......__ | 2 | 75 |
MIMAT0036244 | chi-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0035830 | bra-miR162-5p | 2 | __...... | 7 | 75 |
MIMAT0035070 | efu-miR-9329 | 8 | __...... | 3 | 75 |
MIMAT0035057 | efu-miR-202 | 3 | ......__ | 8 | 75 |
MIMAT0034885 | efu-miR-9189g | 6 | ......__ | 1 | 75 |
MIMAT0034736 | eca-miR-9159 | 7 | ......__ | 2 | 75 |
MIMAT0034560 | eca-miR-9019 | 3 | ......__ | 8 | 75 |
MIMAT0034033 | gra-miR8663b | 2 | __...... | 7 | 75 |
MIMAT0033946 | atr-miR477 | 1 | _......_ | 6 | 75 |
MIMAT0032969 | ppc-miR-8251-3p | 6 | __...... | 1 | 75 |
MIMAT0032740 | ssa-miR-8158-5p | 1 | ......__ | 6 | 75 |
MIMAT0031644 | bbe-miR-210-3p | 7 | _......_ | 2 | 75 |
MIMAT0031281 | stu-miR162b-5p | 2 | __...... | 7 | 75 |
MIMAT0031279 | stu-miR162a-5p | 2 | __...... | 7 | 75 |
MIMAT0029908 | mmu-miR-7689-5p | 3 | __...... | 8 | 75 |
MIMAT0029123 | hcmv-miR-UL69 | 3 | _......_ | 8 | 75 |
MIMAT0028823 | mdo-miR-7383-3p | 1 | _......_ | 6 | 75 |
MIMAT0028820 | mdo-miR-7382-5p | 1 | _......_ | 6 | 75 |
MIMAT0028694 | mdo-miR-7342-5p | 8 | __...... | 3 | 75 |
MIMAT0028492 | mdo-miR-7263-5p | 1 | __...... | 6 | 75 |
MIMAT0028305 | mml-miR-7180-3p | 8 | _......_ | 3 | 75 |
MIMAT0028282 | mml-miR-7172-5p | 8 | _......_ | 3 | 75 |
MIMAT0028178 | dev-miR-D8-5p | 6 | __...... | 1 | 75 |
MIMAT0028170 | dev-miR-D1-3p | 7 | ......__ | 2 | 75 |
MIMAT0026047 | mdm-miR7121h | 7 | ......__ | 2 | 75 |
MIMAT0026046 | mdm-miR7121g | 7 | ......__ | 2 | 75 |
MIMAT0026045 | mdm-miR7121f | 7 | ......__ | 2 | 75 |
MIMAT0026044 | mdm-miR7121e | 7 | ......__ | 2 | 75 |
MIMAT0026043 | mdm-miR7121d | 7 | ......__ | 2 | 75 |
MIMAT0026042 | mdm-miR7121c | 7 | ......__ | 2 | 75 |
MIMAT0026041 | mdm-miR7121b | 7 | ......__ | 2 | 75 |
MIMAT0026040 | mdm-miR7121a | 7 | ......__ | 2 | 75 |
MIMAT0028078 | mmu-miR-7086-5p | 1 | ......__ | 6 | 75 |
MIMAT0028075 | mmu-miR-7084-3p | 6 | _......_ | 1 | 75 |
MIMAT0028032 | mmu-miR-7064-5p | 3 | _......_ | 8 | 75 |
MIMAT0027971 | mmu-miR-7033-3p | 6 | __...... | 1 | 75 |
MIMAT0027933 | mmu-miR-7014-3p | 6 | ......__ | 1 | 75 |
MIMAT0027850 | mmu-miR-6974-5p | 3 | __...... | 8 | 75 |
MIMAT0027823 | mmu-miR-6961-3p | 7 | ......__ | 2 | 75 |
MIMAT0027668 | hsa-miR-6884-5p | 1 | _......_ | 6 | 75 |
MIMAT0027663 | hsa-miR-6881-3p | 8 | ......__ | 3 | 75 |
MIMAT0027655 | hsa-miR-6877-3p | 8 | _......_ | 3 | 75 |
MIMAT0027632 | hsa-miR-6866-5p | 3 | _......_ | 8 | 75 |
MIMAT0027575 | hsa-miR-6836-3p | 7 | __...... | 2 | 75 |
MIMAT0027539 | hsa-miR-6819-3p | 8 | _......_ | 3 | 75 |
MIMAT0027457 | hsa-miR-6778-3p | 6 | __...... | 1 | 75 |
MIMAT0027390 | hsa-miR-6744-3p | 8 | _......_ | 3 | 75 |
MIMAT0025714 | gga-miR-6618-5p | 1 | _......_ | 6 | 75 |
MIMAT0025654 | gga-miR-6573-3p | 2 | __...... | 7 | 75 |
MIMAT0025140 | mmu-miR-6391 | 2 | __...... | 7 | 75 |
MIMAT0024968 | hme-miR-282 | 8 | _......_ | 3 | 75 |
MIMAT0024444 | mse-miR-282 | 8 | _......_ | 3 | 75 |
MIMAT0024401 | ppy-miR-3188 | 1 | _......_ | 6 | 75 |
MIMAT0024385 | ppy-miR-1273e | 1 | __...... | 6 | 75 |
MIMAT0024102 | ggo-miR-485 | 1 | _......_ | 6 | 75 |
MIMAT0023672 | ame-miR-6048 | 1 | _......_ | 6 | 75 |
MIMAT0023651 | bna-miR6031 | 1 | ......__ | 6 | 75 |
MIMAT0023576 | tca-miR-6017-3p | 6 | _......_ | 1 | 75 |
MIMAT0023353 | hco-miR-5902-3p | 1 | ......__ | 6 | 75 |
MIMAT0021849 | aca-miR-202-5p.2 | 3 | ......__ | 8 | 75 |
MIMAT0021059 | gma-miR5036 | 1 | _......_ | 6 | 75 |
MIMAT0019901 | hsa-miR-4757-5p | 8 | _......_ | 3 | 75 |
MIMAT0019312 | oar-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0018915 | smr-miR-282 | 8 | _......_ | 3 | 75 |
MIMAT0018832 | tca-miR-3870-5p | 3 | __...... | 8 | 75 |
MIMAT0018791 | tca-miR-3859-3p | 2 | ......__ | 7 | 75 |
MIMAT0016435 | cin-miR-4000e-3p | 7 | _......_ | 2 | 75 |
MIMAT0016236 | ppy-miR-1827 | 2 | __...... | 7 | 75 |
MIMAT0016166 | ppy-miR-1236 | 6 | ......__ | 1 | 75 |
MIMAT0016026 | ppy-miR-583 | 3 | ......__ | 8 | 75 |
MIMAT0015902 | ppy-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0017680 | aly-miR163-3p.1 | 3 | ......__ | 8 | 75 |
MIMAT0017613 | aly-miR831-5p | 3 | ......__ | 8 | 75 |
MIMAT0017447 | aly-miR162b-5p | 2 | __...... | 7 | 75 |
MIMAT0017445 | aly-miR162a-5p | 2 | __...... | 7 | 75 |
MIMAT0015576 | bmo-miR-3382-3p | 6 | __...... | 1 | 75 |
MIMAT0015458 | bmo-miR-3273 | 6 | __...... | 1 | 75 |
MIMAT0015070 | hsa-miR-3188 | 1 | _......_ | 6 | 75 |
MIMAT0015063 | hsa-miR-3183 | 6 | _......_ | 1 | 75 |
MIMAT0019207 | hsa-miR-3152-5p | 8 | __...... | 3 | 75 |
MIMAT0014646 | tgu-miR-130b-5p | 6 | ......__ | 1 | 75 |
MIMAT0014498 | tgu-miR-2988 | 6 | ......__ | 1 | 75 |
MIMAT0017388 | csi-miR162-5p | 3 | __...... | 8 | 75 |
MIMAT0016943 | rlcv-miR-rL1-21-3p | 8 | _......_ | 3 | 75 |
MIMAT0013782 | bmo-miR-306b | 2 | __...... | 7 | 75 |
MIMAT0013159 | eca-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0013496 | mtr-miR2675 | 2 | __...... | 7 | 75 |
MIMAT0013494 | mtr-miR2673b | 6 | ......__ | 1 | 75 |
MIMAT0013493 | mtr-miR2673a | 6 | ......__ | 1 | 75 |
MIMAT0012530 | dsi-miR-2584-3p | 2 | ......__ | 7 | 75 |
MIMAT0011798 | bta-miR-2290 | 6 | _......_ | 1 | 75 |
MIMAT0009781 | nve-miR-2030-3p | 6 | ......__ | 1 | 75 |
MIMAT0019149 | bfl-miR-210-5p | 7 | _......_ | 2 | 75 |
MIMAT0009435 | mmu-miR-1962 | 1 | _......_ | 6 | 75 |
MIMAT0009328 | bta-miR-485 | 1 | _......_ | 6 | 75 |
MIMAT0008386 | tca-miR-282-5p | 8 | _......_ | 3 | 75 |
MIMAT0008256 | ptr-miR-583 | 3 | ......__ | 8 | 75 |
MIMAT0008052 | ptr-miR-1827 | 2 | __...... | 7 | 75 |
MIMAT0007968 | ptr-miR-1236 | 6 | ......__ | 1 | 75 |
MIMAT0026917 | hsa-miR-1910-3p | 1 | __...... | 6 | 75 |
MIMAT0006767 | hsa-miR-1827 | 2 | __...... | 7 | 75 |
MIMAT0006725 | cfa-miR-485 | 1 | _......_ | 6 | 75 |
MIMAT0026911 | mml-miR-877-3p | 6 | ......__ | 1 | 75 |
MIMAT0006473 | mml-miR-627-3p | 7 | ......__ | 2 | 75 |
MIMAT0006445 | mml-miR-583 | 3 | ......__ | 8 | 75 |
MIMAT0006342 | mml-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0026808 | mml-miR-33b-3p | 7 | __...... | 2 | 75 |
MIMAT0007684 | gga-miR-1773-3p | 3 | _......_ | 8 | 75 |
MIMAT0007664 | gga-miR-1757 | 3 | _......_ | 8 | 75 |
MIMAT0007595 | gga-miR-1703-5p | 1 | _......_ | 6 | 75 |
MIMAT0007517 | gga-miR-1642 | 3 | _......_ | 8 | 75 |
MIMAT0007501 | gga-miR-1630 | 2 | ......__ | 7 | 75 |
MIMAT0007484 | gga-miR-1617 | 1 | _......_ | 6 | 75 |
MIMAT0007451 | gga-miR-1589 | 8 | _......_ | 3 | 75 |
MIMAT0005591 | hsa-miR-1236-3p | 6 | ......__ | 1 | 75 |
MIMAT0005287 | rno-miR-879-5p | 1 | _......_ | 6 | 75 |
MIMAT0004950 | hsa-miR-877-3p | 7 | ......__ | 2 | 75 |
MIMAT0004842 | mmu-miR-879-5p | 1 | _......_ | 6 | 75 |
MIMAT0004094 | mdo-miR-31-5p | 2 | __...... | 7 | 75 |
MIMAT0003715 | ebv-miR-BART17-5p | 2 | ......__ | 7 | 75 |
MIMAT0003499 | mmu-miR-709 | 2 | __...... | 7 | 75 |
MIMAT0003248 | hsa-miR-583 | 3 | ......__ | 8 | 75 |
MIMAT0003203 | rno-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0003128 | mmu-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0002175 | hsa-miR-485-5p | 1 | _......_ | 6 | 75 |
MIMAT0026530 | gga-miR-130b-5p | 6 | ......__ | 1 | 75 |
MIMAT0000346 | dme-miR-282-5p | 8 | _......_ | 3 | 75 |
MIMAT0031877 | ath-miR162b-5p | 3 | __...... | 8 | 75 |
MIMAT0031876 | ath-miR162a-5p | 3 | __...... | 8 | 75 |