Result for your query miRNA sequence
>bpcv2-miR-b1
aauacugu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1aatactgt8
MIMAT0033384str-miR-8366b-5p8........1100
MIMAT0033306str-miR-8366a-5p8........1100
MIMAT0020277bpcv2-miR-B11........8100
MIMAT0020276bpcv1-miR-B11........8100
MIMAT0015795ppy-miR-199b-3p8........1100
MIMAT0036924oha-miR-429-3p2......._887
MIMAT0036726oha-miR-144-3p8_.......287
MIMAT0036612tch-miR-200b-3p2......._887
MIMAT0036473tch-miR-200c-3p2......._887
MIMAT0036226chi-miR-4292......._887
MIMAT0036047chi-miR-200c2......._887
MIMAT0036046chi-miR-200b2......._887
MIMAT0035966chi-miR-144-3p8_.......287
MIMAT0035285gsa-miR-8-3p2......._887
MIMAT0035096efu-miR-200c2......._887
MIMAT0035012efu-miR-200b2......._887
MIMAT0033413str-miR-8379a-3p2......._887
MIMAT0033341str-miR-236-3p2......._887
MIMAT0032630ssa-miR-429-3p2......._887
MIMAT0032476ssa-miR-200a-3p2......._887
MIMAT0032406ssa-miR-16a-3p8......._287
MIMAT0031609bbe-miR-200b-5p2......._887
MIMAT0031607bbe-miR-200a-5p2......._887
MIMAT0030757prd-miR-236-3p2......._887
MIMAT0030044oar-miR-200c2......._887
MIMAT0030043oar-miR-200b2......._887
MIMAT0032213lva-miR-200-3p2......._887
MIMAT0032166pmi-miR-200-3p2......._887
MIMAT0029759cbn-miR-2362......._887
MIMAT0029510ipu-miR-429b2......._887
MIMAT0029509ipu-miR-429a2......._887
MIMAT0029455ipu-miR-200c2......._887
MIMAT0029454ipu-miR-200b2......._887
MIMAT0031137aja-miR-1448_.......287
MIMAT0028260mml-miR-3167-5p7......._187
MIMAT0026297ccr-miR-4292......._887
MIMAT0026259ccr-miR-200b2......._887
MIMAT0025437pol-miR-144-3p8_.......287
MIMAT0025364ssc-miR-1448_.......287
MIMAT0025046sma-miR-8-3p2......._887
MIMAT0024988hme-miR-82......._887
MIMAT0024456mse-miR-82......._887
MIMAT0024304ggo-miR-4292......._887
MIMAT0024299ggo-miR-200b2......._887
MIMAT0024051ptr-miR-200c2......._887
MIMAT0023960cgr-miR-4292......._887
MIMAT0023843cgr-miR-200c2......._887
MIMAT0023842cgr-miR-200b2......._887
MIMAT0023794cgr-miR-16-3p8......._287
MIMAT0023431hco-miR-59361_.......787
MIMAT0022825sha-miR-200c2......._887
MIMAT0022804sha-miR-200b2......._887
MIMAT0022572ola-miR-200b2......._887
MIMAT0021968aca-miR-457-3p8......._287
MIMAT0021957aca-miR-429-3p2......._887
MIMAT0021847aca-miR-200b-3p2......._887
MIMAT0021772aca-miR-144-3p8_.......287
MIMAT0021506asu-miR-236-3p2......._887
MIMAT0020591ssc-miR-4292......._887
MIMAT0020260emu-miR-82......._887
MIMAT0020234egr-miR-82......._887
MIMAT0019784hsa-miR-4693-5p1_.......787
MIMAT0019547pma-miR-429-3p2......._887
MIMAT0019510pma-miR-200b-3p2......._887
MIMAT0019475pma-miR-144-3p8_.......287
MIMAT0018437nlo-miR-82......._887
MIMAT0016252sja-miR-8-3p2......._887
MIMAT0015886ppy-miR-4292......._887
MIMAT0015698nvi-miR-82......._887
MIMAT0014737api-miR-82......._887
MIMAT0014596tgu-miR-144-3p8_.......287
MIMAT0014592tgu-miR-200b-3p2......._887
MIMAT0014647tgu-miR-16a-3p8......._287
MIMAT0014409cqu-miR-8-3p2......._887
MIMAT0014215aae-miR-8-3p2......._887
MIMAT0014121bma-miR-2362......._887
MIMAT0013024eca-miR-1448_.......287
MIMAT0012974eca-miR-200c2......._887
MIMAT0012919eca-miR-4292......._887
MIMAT0012910eca-miR-200b2......._887
MIMAT0012741mdo-miR-4292......._887
MIMAT0012706isc-miR-82......._887
MIMAT0012669dpu-miR-82......._887
MIMAT0011672ppc-miR-2362......._887
MIMAT0011546crm-miR-2362......._887
MIMAT0011291dre-miR-429b2......._887
MIMAT0011240sme-miR-8b-3p2......._887
MIMAT0010149lmi-miR-8-3p2......._887
MIMAT0009652spu-miR-200-3p2......._887
MIMAT0009609sko-miR-2002......._887
MIMAT0009561lgi-miR-82......._887
MIMAT0009507cte-miR-82......._887
MIMAT0009492bfl-miR-200b2......._887
MIMAT0009491bfl-miR-200a2......._887
MIMAT0009315bta-miR-4292......._887
MIMAT0009234bta-miR-1448_.......287
MIMAT0009066dya-miR-82......._887
MIMAT0009013dwi-miR-82......._887
MIMAT0008954dvi-miR-8-3p2......._887
MIMAT0008889dsi-miR-82......._887
MIMAT0008772dse-miR-82......._887
MIMAT0008710dpe-miR-82......._887
MIMAT0008647dmo-miR-82......._887
MIMAT0008593dgr-miR-82......._887
MIMAT0008499der-miR-82......._887
MIMAT0008408dan-miR-82......._887
MIMAT0008356tca-miR-8-3p2......._887
MIMAT0006734cfa-miR-1448_.......287
MIMAT0006664cfa-miR-200c2......._887
MIMAT0006410mml-miR-548a2......._887
MIMAT0006325mml-miR-429-3p2......._887
MIMAT0006202mml-miR-1448_.......287
MIMAT0026786gga-miR-16c-3p8......._287
MIMAT0006133csa-miR-2002......._887
MIMAT0006110cin-miR-200-3p2......._887
MIMAT0007167oan-miR-16a-3p8......._287
MIMAT0007128oan-miR-429-3p2......._887
MIMAT0006938oan-miR-200b-3p2......._887
MIMAT0006903oan-miR-144-3p8_.......287
MIMAT0006848oan-miR-16c-3p8......._287
MIMAT0004156mdo-miR-200b-3p2......._887
MIMAT0004150mdo-miR-200c-3p2......._887
MIMAT0026690mdo-miR-16-1-3p8......._287
MIMAT0004114mdo-miR-144-3p8_.......287
MIMAT0003972sme-miR-8a-3p2......._887
MIMAT0003842bta-miR-200b2......._887
MIMAT0003823bta-miR-200c2......._887
MIMAT0004193bmo-miR-8-3p2......._887
MIMAT0003703xtr-miR-4292......._887
MIMAT0003694xtr-miR-200b2......._887
MIMAT0003687xtr-miR-1448_.......287
MIMAT0003371gga-miR-429-3p2......._887
MIMAT0003021tni-miR-1448_.......287
MIMAT0003020fru-miR-1448_.......287
MIMAT0002984tni-miR-200b2......._887
MIMAT0002983fru-miR-200b2......._887
MIMAT0002980tni-miR-4292......._887
MIMAT0002979fru-miR-4292......._887
MIMAT0026594mml-miR-16-1-3p8......._287
MIMAT0002265ppa-miR-1448_.......287
MIMAT0002264mne-miR-1448_.......287
MIMAT0002263ppy-miR-1448_.......287
MIMAT0002262ptr-miR-1448_.......287
MIMAT0002199ppy-miR-200c1......._787
MIMAT0002197ggo-miR-200c1......._787
MIMAT0002195mml-miR-200c-3p1......._787
MIMAT0001863dre-miR-200c-3p2......._887
MIMAT0001862dre-miR-200b-3p2......._887
MIMAT0001841dre-miR-144-3p8_.......287
MIMAT0001624dre-miR-429a2......._887
MIMAT0001539cfa-miR-4292......._887
MIMAT0001538rno-miR-4292......._887
MIMAT0001537mmu-miR-429-3p2......._887
MIMAT0001536hsa-miR-4292......._887
MIMAT0001525aga-miR-82......._887
MIMAT0001490ame-miR-82......._887
MIMAT0001346xla-miR-4292......._887
MIMAT0001210dps-miR-82......._887
MIMAT0001172gga-miR-200b-3p2......._887
MIMAT0026500gga-miR-16-1-3p8......._287
MIMAT0000875rno-miR-200b-3p2......._887
MIMAT0000873rno-miR-200c-3p2......._887
MIMAT0000850rno-miR-144-3p8_.......287
MIMAT0000657mmu-miR-200c-3p2......._887
MIMAT0000617hsa-miR-200c-3p2......._887
MIMAT0004625mmu-miR-16-1-3p8......._287
MIMAT0000500cbr-miR-2362......._887
MIMAT0000436hsa-miR-144-3p8_.......287
MIMAT0000318hsa-miR-200b-3p2......._887
MIMAT0000291cel-miR-236-3p2......._887
MIMAT0000233mmu-miR-200b-3p2......._887
MIMAT0000156mmu-miR-144-3p8_.......287
MIMAT0000113dme-miR-8-3p2......._887
MIMAT0004489hsa-miR-16-1-3p8......._287
MIMAT0036792oha-miR-199b-3p8.c......187
MIMAT0036790oha-miR-199a-3p8.c......187
MIMAT0036529tch-miR-199a-3p8.c......187
MIMAT0036479tch-miR-199b-3p8.c......187
MIMAT0036041chi-miR-199c-3p8.c......187
MIMAT0036039chi-miR-199b-3p8.c......187
MIMAT0036037chi-miR-199a-3p8.c......187
MIMAT0033587sma-miR-8441-3p1......t.887
MIMAT0032461ssa-miR-199a-3p8.c......187
MIMAT0030040oar-miR-199a-3p8.c......187
MIMAT0031093ipu-miR-199a-3p8.c......187
MIMAT0026256ccr-miR-199-3p8.c......187
MIMAT0025441pol-miR-199a-3p8.c......187
MIMAT0027267pgi-miR6143a1.g......887
MIMAT0023837cgr-miR-199a-3p8.c......187
MIMAT0022785sha-miR-199a8.c......187
MIMAT0022539ola-miR-199a-3p8.c......187
MIMAT0019349mmu-miR-101c8.g......187
MIMAT0016536cin-miR-4021-3p8......t.187
MIMAT0015793ppy-miR-199a-3p8.c......187
MIMAT0014617tgu-miR-199-3p8.c......187
MIMAT0013875ssc-miR-199a-3p8.c......187
MIMAT0013781eca-miR-199b-3p8.c......187
MIMAT0012961eca-miR-199a-3p8.c......187
MIMAT0012495dsi-miR-9608......c.187
MIMAT0009766nve-miR-2024e-5p8......c.187
MIMAT0008062ptr-miR-199b8.c......187
MIMAT0009192ptr-miR-199a-3p8.c......187
MIMAT0006642cfa-miR-1998.c......187
MIMAT0006232mml-miR-199a-3p8.c......187
MIMAT0007574gga-miR-1685-3p8.t......187
MIMAT0006109cin-miR-199-3p8.c......187
MIMAT0007173oan-miR-199-3p8.c......187
MIMAT0026678mdo-miR-199b-3p8.c......187
MIMAT0003746bta-miR-199a-3p8.c......187
MIMAT0031922dre-miR-199-3-3p8.c......187
MIMAT0004738rno-miR-199a-3p8.c......187
MIMAT0004667mmu-miR-199b-3p8.c......187
MIMAT0004563hsa-miR-199b-3p8.c......187
MIMAT0000232hsa-miR-199a-3p8.c......187
MIMAT0000230mmu-miR-199a-3p8.c......187
MIMAT0036794oha-miR-199c-3p7__......275
MIMAT0036745oha-miR-16a-3p7_......_275
MIMAT0036653oha-miR-101b-3p7__......275
MIMAT0036651oha-miR-101a-3p8__......375
MIMAT0036607tch-miR-5037......__275
MIMAT0036507tch-miR-1018__......375
MIMAT0036258chi-miR-496-3p8......__375
MIMAT0035900chi-miR-101-3p7__......275
MIMAT0035783tae-miR9669-5p1__......675
MIMAT0035048efu-miR-9186d6__......175
MIMAT0035014efu-miR-4293......__875
MIMAT0034946efu-miR-1997__......275
MIMAT0034913efu-miR-1018__......375
MIMAT0034908efu-miR-9186f1_......_675
MIMAT0034311cfa-miR-88211__......675
MIMAT0034195gra-miR87633......__875
MIMAT0033723pxy-miR-3088_......_375
MIMAT0033469str-miR-8379b-5p3_......_875
MIMAT0032744ssa-miR-2184-5p7__......275
MIMAT0032407ssa-miR-16a-2-3p8_......_375
MIMAT0032368ssa-miR-144-3p8__......375
MIMAT0032283ssa-miR-101b-3p7__......275
MIMAT0032281ssa-miR-101a-3p7__......275
MIMAT0031841cpa-miR81447__......275
MIMAT0031679bbe-miR-4859-3p8__......375
MIMAT0031539ppe-miR8126-3p8_......_375
MIMAT0031011hsa-miR-80842......__775
MIMAT0030814prd-miR-7960-5p6......__175
MIMAT0030750prd-miR-7945-5p1__......675
MIMAT0030683prd-miR-7920-3p3__......875
MIMAT0030601prd-miR-7901-3p1__......675
MIMAT0032231lva-miR-2010-3p2__......775
MIMAT0032184pmi-miR-2010-3p2__......775
MIMAT0029629crm-miR-2401_......_675
MIMAT0029552ipu-miR-75567__......275
MIMAT0029478ipu-miR-2237......__275
MIMAT0029421ipu-miR-1448__......375
MIMAT0029387ipu-miR-101b7__......275
MIMAT0029386ipu-miR-101a7__......275
MIMAT0026336bma-miR-58388......__375
MIMAT0026225ccr-miR-1448__......375
MIMAT0026197ccr-miR-101b8__......375
MIMAT0026196ccr-miR-101a7__......275
MIMAT0027847mmu-miR-6972-3p2__......775
MIMAT0025558bta-miR-503-3p8......__375
MIMAT0024936hme-miR-128......__375
MIMAT0024797hvu-miR5049b6......__175
MIMAT0024788hbr-miR61697......__275
MIMAT0024466mse-miR-128......__375
MIMAT0024223ggo-miR-4968......__375
MIMAT0023977cgr-miR-5036......__175
MIMAT0023969cgr-miR-4966......__175
MIMAT0023729cgr-miR-101b-3p7__......275
MIMAT0023379hco-miR-2363......__875
MIMAT0022811sha-miR-1018__......375
MIMAT0022606ola-miR-101b-3p8__......375
MIMAT0022543ola-miR-101a-3p8__......375
MIMAT0023102tur-miR-12a-5p8......__375
MIMAT0023044tur-miR-12b-5p8......__375
MIMAT0022322cin-miR-5599-3p7__......275
MIMAT0022115pti-miR54826__......175
MIMAT0021802aca-miR-16b-3p8_......_375
MIMAT0021711aca-miR-101-3p7__......275
MIMAT0021462asu-miR-50-3p7_......_275
MIMAT0021416asu-lin-4-3p6__......175
MIMAT0020566tae-miR50848__......375
MIMAT0020123xbo-miR-20127......__275
MIMAT0020087bfl-miR-4859-3p8__......375
MIMAT0019706hsa-miR-4645-3p8__......375
MIMAT0019684osa-miR3981-3p6......__175
MIMAT0019382pma-miR-16-3p8_......_375
MIMAT0019320oar-miR-496-3p8......__375
MIMAT0018420nlo-miR-128......__375
MIMAT0018697tca-miR-3833-3p6__......175
MIMAT0016410cin-miR-135-3p8__......375
MIMAT0016069ppy-miR-6306......__175
MIMAT0015917ppy-miR-4968......__375
MIMAT0015670nvi-miR-128......__375
MIMAT0015628bmo-miR-34201__......675
MIMAT0015541bmo-miR-33552......__775
MIMAT0014579tgu-miR-217-5p1_......_675
MIMAT0014508tgu-miR-101-3p8__......375
MIMAT0014395cqu-miR-12-3p8......__375
MIMAT0014253aae-miR-12-5p8......__375
MIMAT0013166eca-miR-4968......__375
MIMAT0012951eca-miR-1017__......275
MIMAT0012860rno-miR-496-3p6......__175
MIMAT0012684isc-miR-128......__375
MIMAT0012638dpu-miR-128......__375
MIMAT0013403mtr-miR26372......__775
MIMAT0012388dps-miR-2563-5p8......__375
MIMAT0012192xtr-miR-21847__......275
MIMAT0012059bta-miR-24692__......775
MIMAT0011871bta-miR-199c7__......275
MIMAT0011288dre-miR-21847__......275
MIMAT0011251sme-miR-2158-5p8......__375
MIMAT0011250sme-miR-2157-5p8......__375
MIMAT0012131sme-miR-2148-3p1_......_675
MIMAT0010185ssc-miR-1017__......275
MIMAT0009906cfa-miR-4968......__375
MIMAT0009751spu-miR-20102__......775
MIMAT0009564lgi-miR-128......__375
MIMAT0009512cte-miR-128......__375
MIMAT0009151bmo-miR-128......__375
MIMAT0009336bta-miR-4968......__375
MIMAT0009017dwi-miR-128......__375
MIMAT0032088dvi-miR-308-5p8_......_375
MIMAT0008911dvi-miR-12-5p8......__375
MIMAT0008852dsi-miR-128......__375
MIMAT0008766dse-miR-128......__375
MIMAT0008762dpe-miR-128......__375
MIMAT0008630dmo-miR-128......__375
MIMAT0008560dgr-miR-128......__375
MIMAT0008531der-miR-128......__375
MIMAT0008418dan-miR-128......__375
MIMAT0008358tca-miR-12-5p8......__375
MIMAT0008343ptr-miR-9366__......175
MIMAT0008288ptr-miR-6306......__175
MIMAT0008170ptr-miR-4968......__375
MIMAT0007760ssc-miR-199b-3p7__......275
MIMAT0006600cfa-miR-1017__......275
MIMAT0026890mml-miR-503-3p8......__375
MIMAT0006358mml-miR-4968......__375
MIMAT0026799mml-miR-20b-3p1__......675
MIMAT0015256cin-miR-124-1-5p6......__175
MIMAT0006099cin-miR-1017__......275
MIMAT0007011oan-miR-1017__......275
MIMAT0005527aga-miR-128......__375
MIMAT0005194ppt-miR10673_......_875
MIMAT0005474dme-miR-960-5p8......__375
MIMAT0004979hsa-miR-9366__......175
MIMAT0004098mdo-miR-101-3p7__......275
MIMAT0003975sme-miR-12-5p8......__375
MIMAT0003776gga-miR-144-3p8__......375
MIMAT0003662xtr-miR-101a7__......275
MIMAT0003619xtr-miR-199a-3p7__......275
MIMAT0003520bta-miR-1017__......275
MIMAT0003738mmu-miR-496a-3p8......__375
MIMAT0003299hsa-miR-6306......__175
MIMAT0017224rno-miR-503-3p8......__375
MIMAT0004790mmu-miR-503-3p7......__275
MIMAT0003040tni-miR-101b7__......275
MIMAT0003039fru-miR-101b7__......275
MIMAT0002903tni-miR-101a7__......275
MIMAT0002902fru-miR-101a7__......275
MIMAT0002818hsa-miR-4968......__375
MIMAT0002433mne-miR-1017__......275
MIMAT0002432lla-miR-1017__......275
MIMAT0002431mml-miR-101-3p7__......275
MIMAT0002430ptr-miR-1017__......275
MIMAT0002429ppy-miR-1017__......275
MIMAT0002428ppa-miR-1017__......275
MIMAT0002427age-miR-1017__......275
MIMAT0002426sla-miR-1017__......275
MIMAT0002425ggo-miR-1017__......275
MIMAT0032004dre-miR-457b-3p8_......_375
MIMAT0001815dre-miR-101b7__......275
MIMAT0001814dre-miR-101a7__......275
MIMAT0001472ame-miR-128......__375
MIMAT0003155dre-miR-199-3p7__......275
MIMAT0001216dps-miR-128......__375
MIMAT0001185gga-miR-101-3p8__......375
MIMAT0003721gga-miR-199-3p7__......275
MIMAT0000823rno-miR-101a-3p7__......275
MIMAT0000616mmu-miR-101b-3p8__......375
MIMAT0000615rno-miR-101b-3p7__......275
MIMAT0020833dme-miR-308-5p8_......_375
MIMAT0000133mmu-miR-101a-3p7__......275
MIMAT0000117dme-miR-12-5p8......__375
MIMAT0000099hsa-miR-101-3p7__......275