Result for your query miRNA sequence
>rrv-miR-rr1-9-5p
aauaugu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1aatatgt7
MIMAT0036619tch-miR-9771p1.......7100
MIMAT0034000gra-miR8643b7.......1100
MIMAT0033999gra-miR8643a7.......1100
MIMAT0030237bdi-miR7748a-3p1.......7100
MIMAT0028362mml-miR-7199-5p2.......8100
MIMAT0018320gma-miR44027.......1100
MIMAT0036775oha-miR-190b-5p3_......885
MIMAT0036772oha-miR-190a-5p3_......885
MIMAT0036580tch-miR-190a3_......885
MIMAT0036501tch-miR-190b3_......885
MIMAT0036350gma-miR97318_......385
MIMAT0036021chi-miR-190b3_......885
MIMAT0036019chi-miR-190a-5p3_......885
MIMAT0035809tae-miR5049-3p1......_685
MIMAT0035560dvi-miR-190-5p3_......885
MIMAT0035252gsa-miR-190-5p3_......885
MIMAT0035202dme-miR-9369-3p8_......385
MIMAT0034170gra-miR87468......_385
MIMAT0034020gra-miR86551_......685
MIMAT0033576sma-miR-8436-5p1_......685
MIMAT0033562sma-miR-8429-5p3......_885
MIMAT0033391str-miR-8374-3p3......_885
MIMAT0033383str-miR-8373-3p3_......885
MIMAT0033300str-miR-50-5p3_......885
MIMAT0033072ppc-miR-8284-3p8_......385
MIMAT0032438ssa-miR-190b-5p3_......885
MIMAT0032436ssa-miR-190a-5p3_......885
MIMAT0031603bbe-miR-190-5p3_......885
MIMAT0030493prd-miR-7874-3p8......_385
MIMAT0030482prd-miR-50-5p3_......885
MIMAT0030209bdi-miR7736-3p8_......385
MIMAT0030151bdi-miR7714-3p3......_885
MIMAT0029733cbn-miR-623_......885
MIMAT0029732cbn-miR-903_......885
MIMAT0029731cbn-miR-503_......885
MIMAT0029445ipu-miR-190b3_......885
MIMAT0029444ipu-miR-190a3_......885
MIMAT0028389mmu-miR-7210-3p3_......885
MIMAT0026249ccr-miR-1903_......885
MIMAT0028142ddi-miR-7131c-3p6......_185
MIMAT0028138ddi-miR-7131a-3p6......_185
MIMAT0025607gga-miR-3607-5p7_......285
MIMAT0025392xtr-miR-1903_......885
MIMAT0025367ssc-miR-190a3_......885
MIMAT0025186ptc-miR64603_......885
MIMAT0025027sma-miR-190-5p3_......885
MIMAT0024944hme-miR-1903_......885
MIMAT0024424mse-miR-1903_......885
MIMAT0024270ggo-miR-190b3_......885
MIMAT0023821cgr-miR-190b3_......885
MIMAT0023819cgr-miR-190a3_......885
MIMAT0023518ath-miR5995b6_......185
MIMAT0023517ath-miR5595a6_......185
MIMAT0023502hco-miR-190-5p3_......885
MIMAT0023329hco-miR-503_......885
MIMAT0022769sha-miR-1903_......885
MIMAT0022663ola-miR-190b3_......885
MIMAT0023084tur-miR-190-5p3_......885
MIMAT0022274hsa-miR-5580-3p7_......285
MIMAT0022203mtr-miR2619b-5p1_......685
MIMAT0021823aca-miR-190b3_......885
MIMAT0021821aca-miR-190a-5p3_......885
MIMAT0021461asu-miR-50-5p3_......885
MIMAT0021315mtr-miR5208d6......_185
MIMAT0020588ssc-miR-190b3_......885
MIMAT0020270emu-miR-1903_......885
MIMAT0020245egr-miR-1903_......885
MIMAT0019569pma-miR-45416......_185
MIMAT0019495pma-miR-190b-5p3_......885
MIMAT0019494pma-miR-190a3_......885
MIMAT0018199hsa-miR-39241_......685
MIMAT0018633tca-miR-3805a-3p2_......785
MIMAT0016537cin-miR-4022-3p1......_685
MIMAT0016265sja-miR-190-5p3_......885
MIMAT0015784ppy-miR-190b3_......885
MIMAT0015783ppy-miR-190a3_......885
MIMAT0015706nvi-miR-34776......_185
MIMAT0015673nvi-miR-1903_......885
MIMAT0015632bmo-miR-34243_......885
MIMAT0015515bmo-miR-3327-3p1_......685
MIMAT0015493bmo-miR-33058_......385
MIMAT0015407bmo-miR-32257_......285
MIMAT0014589tgu-miR-190-5p3_......885
MIMAT0026967tgu-miR-2188-3p3_......885
MIMAT0014402cqu-miR-1903_......885
MIMAT0014243aae-miR-1903_......885
MIMAT0014127api-miR-1903_......885
MIMAT0014104bma-miR-503_......885
MIMAT0012958eca-miR-190b3_......885
MIMAT0012896eca-miR-190a3_......885
MIMAT0012756mdo-miR-190b3_......885
MIMAT0012740mdo-miR-190a-5p3_......885
MIMAT0012449dsi-miR-190-5p3_......885
MIMAT0012401dps-miR-2566b-3p7_......285
MIMAT0012227dps-miR-190-5p3_......885
MIMAT0011709ppc-miR-22451......_685
MIMAT0011671ppc-miR-2234b3_......885
MIMAT0011670ppc-miR-2234a3_......885
MIMAT0011626crm-miR-623_......885
MIMAT0011589crm-miR-50-5p3_......885
MIMAT0011518crm-miR-903_......885
MIMAT0011472cbr-miR-90b-3p3_......885
MIMAT0010100aga-miR-1903_......885
MIMAT0010062osa-miR2099-5p3......_885
MIMAT0009873cfa-miR-190b3_......885
MIMAT0009872cfa-miR-190a3_......885
MIMAT0009634sko-miR-1903_......885
MIMAT0009586lgi-miR-1903_......885
MIMAT0009532cte-miR-1903_......885
MIMAT0009489bfl-miR-1903_......885
MIMAT0009153bmo-miR-190-5p3_......885
MIMAT0009252bta-miR-190b3_......885
MIMAT0009251bta-miR-190a3_......885
MIMAT0008375tca-miR-190-5p3_......885
MIMAT0008055ptr-miR-190b3_......885
MIMAT0006222mml-miR-190b3_......885
MIMAT0007537gga-miR-16572_......785
MIMAT0007490gga-miR-16227_......285
MIMAT0006998oan-miR-190b3_......885
MIMAT0006843oan-miR-190a-5p3_......885
MIMAT0005302rno-miR-190b-5p3_......885
MIMAT0005083ppt-miR902j-5p1_......685
MIMAT0005467dme-miR-190-5p3_......885
MIMAT0004440ame-miR-1903_......885
MIMAT0004929hsa-miR-190b3_......885
MIMAT0004852mmu-miR-190b-5p3_......885
MIMAT0004023sme-miR-756-5p3_......885
MIMAT0004003sme-miR-190b-5p3_......885
MIMAT0004001sme-miR-190a-5p3_......885
MIMAT0003747dre-miR-190b3_......885
MIMAT0003110tni-miR-1903_......885
MIMAT0003109fru-miR-1903_......885
MIMAT0002315ppa-miR-1903_......885
MIMAT0002314ggo-miR-190a3_......885
MIMAT0002313ptr-miR-190a3_......885
MIMAT0002312mml-miR-190a-5p3_......885
MIMAT0001854dre-miR-190a3_......885
MIMAT0001309cbr-miR-623_......885
MIMAT0001155gga-miR-190a-5p3_......885
MIMAT0000865rno-miR-190a-5p3_......885
MIMAT0000493cbr-miR-90a3_......885
MIMAT0000475cbr-miR-503_......885
MIMAT0000458hsa-miR-190a-5p3_......885
MIMAT0000220mmu-miR-190a-5p3_......885
MIMAT0000061cel-miR-90-3p3_......885
MIMAT0000034cel-miR-623_......885
MIMAT0000021cel-miR-50-5p3_......885