Result for your query miRNA sequence
>hsv2-miR-h6
aauggaag

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1aatggaag8
MIMAT0026039mdm-miR482d1........8100
MIMAT0015651hsv2-miR-H6-5p1........8100
MIMAT0010055osa-miR2095-3p8........1100
MIMAT0033524sma-miR-8410-5p1......._787
MIMAT0031190stu-miR8002-3p8......._287
MIMAT0030259bdi-miR7757-5p.27_.......187
MIMAT0029331lja-miR1507b8_.......287
MIMAT0029330lja-miR1507a8_.......287
MIMAT0028097ddi-miR-7095-5p7......._187
MIMAT0028061mmu-miR-7077-3p8_.......287
MIMAT0028001mmu-miR-7048-3p8_.......287
MIMAT0022453gma-miR5671a2_.......887
MIMAT0016748cin-miR-4145-3p1......._787
MIMAT0017784esi-miR3454d-3p7_.......187
MIMAT0017770esi-miR3454e-3p7_.......187
MIMAT0017752esi-miR3454c-3p7_.......187
MIMAT0017748esi-miR3454a-3p7_.......187
MIMAT0017746esi-miR3454g-3p7_.......187
MIMAT0011170pvu-miR159a.27_.......187
MIMAT0004453mdv2-miR-M15-5p2_.......887
MIMAT0003744hsv1-miR-H1-5p2_.......887
MIMAT0020345ath-miR447a.2-3p2_.......887
MIMAT0015099cel-miR-51-3p2_.......887
MIMAT0034412cfa-miR-89028......t.187
MIMAT0034008gra-miR86501.g......887
MIMAT0032761ath-miR81651......g.887
MIMAT0027302ppe-miR62751.g......887
MIMAT0014949mmu-miR-3109-5p1......t.887
MIMAT0006768cel-miR-18281.c......887
MIMAT0006868oan-miR-1340-5p8.t......187
MIMAT0022881osa-miR166g-5p1......g.887
MIMAT0037192ata-miR528-5p1__......675
MIMAT0037034ssc-miR-9816-3p2__......775
MIMAT0036952oha-miR-875-3p3__......875
MIMAT0036945oha-miR-7-5p1__......675
MIMAT0036531tch-miR-136-5p8......__375
MIMAT0036465tch-miR-7-5p1__......675
MIMAT0036404gma-miR97671_......_675
MIMAT0036364gma-miR97441......__675
MIMAT0036288chi-miR-7-5p1__......675
MIMAT0035955chi-miR-136-5p8......__375
MIMAT0035282gsa-miR-7-5p1__......675
MIMAT0035187efu-miR-7c1__......675
MIMAT0035167efu-miR-9186e8__......375
MIMAT0035157efu-miR-7a2__......775
MIMAT0035004efu-miR-7b1__......675
MIMAT0034932efu-miR-1368......__375
MIMAT0034864efu-miR-92473......__875
MIMAT0034858efu-miR-9243a7_......_275
MIMAT0034852efu-miR-9234c8__......375
MIMAT0034314cfa-miR-88248_......_375
MIMAT0034260gra-miR87787_......_275
MIMAT0034204gra-miR87686_......_175
MIMAT0034010gra-miR86513......__875
MIMAT0033972esi-miR8623b2_......_775
MIMAT0033951atr-miR29506_......_175
MIMAT0033885atr-miR85962......__775
MIMAT0033883atr-miR8594.21......__675
MIMAT0033620sma-miR-8454-5p1_......_675
MIMAT0033598sma-miR-7-5p1__......675
MIMAT0033532sma-miR-8414-5p7__......275
MIMAT0033159ppc-miR-8364p-5p6......__175
MIMAT0033085ppc-miR-8288-5p3_......_875
MIMAT0033059ppc-miR-8364q-5p6......__175
MIMAT0032693ssa-miR-7a-5p1__......675
MIMAT0031714bbe-miR-7-5p1__......675
MIMAT0031557ppe-miR8130-3p8__......375
MIMAT0030738prd-miR-7940a-5p1__......675
MIMAT0032257rgl-miR78113......__875
MIMAT0030334hhi-miR-77901__......675
MIMAT0032191lva-miR-7-5p1__......675
MIMAT0032141pmi-miR-7-5p1__......675
MIMAT0029898mmu-miR-7686-5p7__......275
MIMAT0029527ipu-miR-7b1__......675
MIMAT0029526ipu-miR-7a1__......675
MIMAT0029309mes-miR29506_......_175
MIMAT0029091gga-miR-7468-3p3_......_875
MIMAT0028938mdo-miR-1540b-5p8_......_375
MIMAT0028696mdo-miR-7343-5p3_......_875
MIMAT0028513mdo-miR-7271-3p3__......875
MIMAT0028459mdo-miR-7246-3p1_......_675
MIMAT0028267mml-miR-7166-3p2__......775
MIMAT0028206dre-miR-7148-5p1_......_675
MIMAT0028202dre-miR-71453......__875
MIMAT0026442sbi-miR5568f-5p6......__175
MIMAT0026328ccr-miR-21921__......675
MIMAT0026320ccr-miR-7b1__......675
MIMAT0026319ccr-miR-7a1__......675
MIMAT0028093mmu-miR-7093-3p7_......_275
MIMAT0028026mmu-miR-7061-5p2_......_775
MIMAT0027868mmu-miR-6983-5p2__......775
MIMAT0027734mmu-miR-6917-5p3__......875
MIMAT0025783gga-miR-6679-5p1__......675
MIMAT0025675gga-miR-6584-5p3__......875
MIMAT0024984hme-miR-71__......675
MIMAT0024779nta-miR61631__......675
MIMAT0024567bta-miR-12461......__675
MIMAT0024426mse-miR-71__......675
MIMAT0024344mml-miR-46501__......675
MIMAT0024004cgr-miR-7b1__......675
MIMAT0023820cgr-miR-19032__......775
MIMAT0023704hsa-miR-60792__......775
MIMAT0023592sly-miR60236_......_175
MIMAT0023591stu-miR60236_......_175
MIMAT0023590sly-miR60221__......675
MIMAT0023589stu-miR60221__......675
MIMAT0023588nta-miR60212__......775
MIMAT0023547ame-miR-6004-5p2......__775
MIMAT0023387hco-miR-71__......675
MIMAT0023161gma-miR57646......__175
MIMAT0022641ola-miR-71__......675
MIMAT0023036tur-miR-7-5p1__......675
MIMAT0022466gma-miR56786_......_175
MIMAT0032130gma-miR5667-5p8......__375
MIMAT0023005ath-miR5654-3p1__......675
MIMAT0022402ath-miR56411__......675
MIMAT0022276hsa-miR-5581-3p6_......_175
MIMAT0022167osa-miR55321_......_675
MIMAT0021983aca-miR-7-5p1__......675
MIMAT0021577asu-miR-5357-3p1......__675
MIMAT0021429asu-miR-7-5p1__......675
MIMAT0021394rmi-miR-53212_......_775
MIMAT0021393rmi-miR-53201__......675
MIMAT0021254mtr-miR52562......__775
MIMAT0021177mtr-miR52193_......_875
MIMAT0021132mtr-miR52043__......875
MIMAT0020288ssp-miR5281__......675
MIMAT0020662bdi-miR528-5p1__......675
MIMAT0020524ath-miR5020a1__......675
MIMAT0020259emu-miR-71__......675
MIMAT0020233egr-miR-71__......675
MIMAT0020017sko-miR-4818g-5p6......__175
MIMAT0019787hsa-miR-4694-3p3......__875
MIMAT0019603pma-miR-4571-5p1_......_675
MIMAT0019372pma-miR-7b1__......675
MIMAT0019370pma-miR-7a-5p1__......675
MIMAT0020368cgr-miR-7a1__......675
MIMAT0019072hsa-miR-45331__......675
MIMAT0018436nlo-miR-71__......675
MIMAT0018309gma-miR43941......__675
MIMAT0018861tca-miR-3882-3p1__......675
MIMAT0018846tca-miR-3877-5p8__......375
MIMAT0018796tca-miR-3861-5p1_......_675
MIMAT0018116hsa-miR-3688-3p2_......_775
MIMAT0018064dme-miR-3645-3p3__......875
MIMAT0018037vvi-miR3633a-5p3......__875
MIMAT0018009vvi-miR2950-5p6_......_175
MIMAT0017911aly-miR42231_......_675
MIMAT0016810cin-miR-4192-3p3_......_875
MIMAT0016633cin-miR-4072-3p3......__875
MIMAT0016249sja-miR-7-5p1__......675
MIMAT0016118ppy-miR-885-5p6......__175
MIMAT0016029ppy-miR-5877_......_275
MIMAT0015659nvi-miR-71__......675
MIMAT0017725aly-miR3445-3p.13__......875
MIMAT0015610bmo-miR-34056......__175
MIMAT0015569bmo-miR-3378-5p6_......_175
MIMAT0015089hsa-miR-32021__......675
MIMAT0022839hsa-miR-3190-3p3__......875
MIMAT0015057hsa-miR-3180-5p6__......175
MIMAT0014734api-miR-71__......675
MIMAT0014600tgu-miR-29967__......275
MIMAT0014510tgu-miR-7-5p1__......675
MIMAT0014423cqu-miR-71__......675
MIMAT0014290aae-miR-71__......675
MIMAT0014099bma-miR-71__......675
MIMAT0019193rlcv-miR-rL1-28-5p1__......675
MIMAT0014048sbi-miR5281__......675
MIMAT0014029zma-miR528b-5p1__......675
MIMAT0014028zma-miR528a-5p1__......675
MIMAT0013902ssc-miR-885-5p6......__175
MIMAT0013128eca-miR-1368......__375
MIMAT0013081eca-miR-885-5p6......__175
MIMAT0012905eca-miR-71__......675
MIMAT0012732mdv2-miR-M32-5p7_......_275
MIMAT0012724iltv-miR-I1-3p8_......_375
MIMAT0012702isc-miR-71__......675
MIMAT0012666dpu-miR-71__......675
MIMAT0013316mtr-miR2609b1__......675
MIMAT0013315mtr-miR2609a1__......675
MIMAT0011939bta-miR-23871__......675
MIMAT0011253sme-miR-7d-5p1__......675
MIMAT0010150mcv-miR-M1-5p1__......675
MIMAT0011158hsa-miR-2115-5p8__......375
MIMAT0009933cfa-miR-8856......__175
MIMAT0009753aqu-miR-2021-5p2_......_775
MIMAT0009651spu-miR-71__......675
MIMAT0009608sko-miR-7-5p1__......675
MIMAT0009560lgi-miR-71__......675
MIMAT0009506cte-miR-71__......675
MIMAT0009464bfl-miR-71__......675
MIMAT0009382bta-miR-8856......__175
MIMAT0009230bta-miR-1368......__375
MIMAT0009119dya-miR-71__......675
MIMAT0009009dwi-miR-71__......675
MIMAT0008931dvi-miR-7-5p1__......675
MIMAT0008901dsi-miR-71__......675
MIMAT0008771dse-miR-71__......675
MIMAT0008742dpe-miR-71__......675
MIMAT0008692dmo-miR-71__......675
MIMAT0008622dgr-miR-71__......675
MIMAT0008537der-miR-71__......675
MIMAT0008410dan-miR-71__......675
MIMAT0015281hsv1-miR-H6-5p3__......875
MIMAT0008355tca-miR-7-5p1__......675
MIMAT0008259ptr-miR-5877_......_275
MIMAT0007972ptr-miR-12461......__675
MIMAT0007829osa-miR18753......__875
MIMAT0006714cfa-miR-1368......__375
MIMAT0006634cfa-miR-71__......675
MIMAT0006522mml-miR-885-5p6......__175
MIMAT0006192mml-miR-1368......__375
MIMAT0006159mml-miR-71__......675
MIMAT0007496gga-miR-1626-3p3__......875
MIMAT0007495gga-miR-1626-5p7_......_275
MIMAT0006120csa-miR-71__......675
MIMAT0006091cin-miR-7-5p1__......675
MIMAT0006078odi-miR-71__......675
MIMAT0005985mdv1-miR-M133_......_875
MIMAT0006986oan-miR-7-5p1__......675
MIMAT0006973oan-miR-1421f-5p1__......675
MIMAT0006969oan-miR-1421d-5p1__......675
MIMAT0005898hsa-miR-12461......__675
MIMAT0003902ppt-miR477g-3p3__......875
MIMAT0004947hsa-miR-885-5p6......__175
MIMAT0026695mdo-miR-141-5p8__......375
MIMAT0004086mdo-miR-71__......675
MIMAT0003971sme-miR-7c-5p1__......675
MIMAT0003970sme-miR-7b-5p1__......675
MIMAT0003969sme-miR-7a-5p1__......675
MIMAT0003843bta-miR-71__......675
MIMAT0004192bmo-miR-7-5p1__......675
MIMAT0003552xtr-miR-71__......675
MIMAT0003253hsa-miR-5877_......_275
MIMAT0003010tni-miR-71__......675
MIMAT0003009fru-miR-71__......675
MIMAT0002884osa-miR528-5p1__......675
MIMAT0002485ptr-miR-71__......675
MIMAT0002484ppa-miR-71__......675
MIMAT0002483mne-miR-71__......675
MIMAT0002482lla-miR-71__......675
MIMAT0002481sla-miR-71__......675
MIMAT0002480ppy-miR-71__......675
MIMAT0002479ggo-miR-71__......675
MIMAT0002295ppa-miR-1368......__375
MIMAT0002294ppy-miR-1368......__375
MIMAT0002293ggo-miR-1368......__375
MIMAT0002292ptr-miR-1368......__375
MIMAT0026561mml-miR-141-5p7__......275
MIMAT0002158ssc-miR-1368......__375
MIMAT0002141ssc-miR-71__......675
MIMAT0015203zma-miR166l-5p2......__775
MIMAT0001523aga-miR-71__......675
MIMAT0001489ame-miR-71__......675
MIMAT0001417oar-miR-1368......__375
MIMAT0001266dre-miR-7a1__......675
MIMAT0001265dre-miR-7b1__......675
MIMAT0001209dps-miR-71__......675
MIMAT0001192gga-miR-7b1__......675
MIMAT0001157gga-miR-71__......675
MIMAT0000842rno-miR-136-5p8......__375
MIMAT0000780rno-miR-7b1__......675
MIMAT0000678mmu-miR-7b-5p1__......675
MIMAT0000677mmu-miR-7a-5p1__......675
MIMAT0000606rno-miR-7a-5p1__......675
MIMAT0000448hsa-miR-136-5p8......__375
MIMAT0000252hsa-miR-7-5p1__......675
MIMAT0000148mmu-miR-136-5p8......__375
MIMAT0000112dme-miR-7-5p1__......675