Result for your query miRNA sequence
>rrv-miR-rr1-13-5p
aauugca

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1aattgca7
MIMAT0036913oha-miR-363-3p1.......7100
MIMAT0036586tch-miR-363-3p1.......7100
MIMAT0036325ocu-miR-367-3p1.......7100
MIMAT0036176chi-miR-363-3p1.......7100
MIMAT0033760pxy-miR-85008.......2100
MIMAT0033709pxy-miR-8499a8.......2100
MIMAT0032899ppc-miR-8227-3p1.......7100
MIMAT0031642bbe-miR-2076-5p1.......7100
MIMAT0029506ipu-miR-3631.......7100
MIMAT0026293ccr-miR-3631.......7100
MIMAT0025395tgu-miR-3671.......7100
MIMAT0024487mse-miR-92b1.......7100
MIMAT0024157ggo-miR-3631.......7100
MIMAT0021949aca-miR-3671.......7100
MIMAT0021946aca-miR-363-3p1.......7100
MIMAT0020215dme-miR-4982-5p8.......2100
MIMAT0020018sko-miR-4818g-3p1.......7100
MIMAT0020012sko-miR-4818c1.......7100
MIMAT0015854ppy-miR-3671.......7100
MIMAT0015852ppy-miR-3631.......7100
MIMAT0015711ssc-miR-3631.......7100
MIMAT0015443bmo-miR-32597.......1100
MIMAT0014501tgu-miR-363-3p1.......7100
MIMAT0014322aae-miR-92b-3p1.......7100
MIMAT0013212eca-miR-3631.......7100
MIMAT0012918eca-miR-3671.......7100
MIMAT0012672dpu-miR-921.......7100
MIMAT0011679ppc-miR-22551.......7100
MIMAT0010117ame-miR-92b1.......7100
MIMAT0010005bfl-miR-2076-5p1.......7100
MIMAT0009574lgi-miR-921.......7100
MIMAT0009521cte-miR-92b1.......7100
MIMAT0009155bmo-miR-92b1.......7100
MIMAT0009299bta-miR-3672.......8100
MIMAT0009120dya-miR-92b1.......7100
MIMAT0008991dwi-miR-92b1.......7100
MIMAT0008962dvi-miR-92b-3p1.......7100
MIMAT0008879dsi-miR-92b1.......7100
MIMAT0008774dse-miR-92b1.......7100
MIMAT0008756dpe-miR-92b1.......7100
MIMAT0008658dmo-miR-92b1.......7100
MIMAT0008624dgr-miR-92b1.......7100
MIMAT0008543der-miR-92b1.......7100
MIMAT0008405dan-miR-92b1.......7100
MIMAT0008118ptr-miR-3671.......7100
MIMAT0006750cfa-miR-3631.......7100
MIMAT0006292mml-miR-3671.......7100
MIMAT0006290mml-miR-363-3p1.......7100
MIMAT0007136oan-miR-13847.......1100
MIMAT0006860oan-miR-363-3p1.......7100
MIMAT0004184mdo-miR-3672.......8100
MIMAT0003702xtr-miR-363-3p1.......7100
MIMAT0003638xtr-miR-3671.......7100
MIMAT0003369gga-miR-3671.......7100
MIMAT0003210rno-miR-363-3p1.......7100
MIMAT0003181mmu-miR-367-3p1.......7100
MIMAT0001874dre-miR-363-3p1.......7100
MIMAT0001528aga-miR-92b1.......7100
MIMAT0001227dps-miR-92b1.......7100
MIMAT0000719hsa-miR-367-3p1.......7100
MIMAT0000708mmu-miR-363-3p1.......7100
MIMAT0000707hsa-miR-363-3p1.......7100
MIMAT0000358dme-miR-92b-3p1.......7100
MIMAT0036960oha-miR-92a2_......785
MIMAT0036959oha-miR-92a-3p2_......785
MIMAT0036899oha-miR-32-5p2_......785
MIMAT0036590tch-miR-25-3p2_......785
MIMAT0036500tch-miR-92a-3p2_......785
MIMAT0036485tch-miR-32-5p2_......785
MIMAT0036304chi-miR-92b2_......785
MIMAT0036303chi-miR-92a-3p2_......785
MIMAT0036100chi-miR-25-3p2_......785
MIMAT0035567dvi-miR-311-3p2_......785
MIMAT0035211dme-miR-9374-5p8_......385
MIMAT0035166efu-miR-252_......785
MIMAT0035160efu-miR-92b2_......785
MIMAT0034995efu-miR-92a2_......785
MIMAT0033548sma-miR-8422-5p6......_185
MIMAT0033357str-miR-92-3p2_......785
MIMAT0033212ppc-miR-8334-5p8_......385
MIMAT0032855ppc-miR-235-3p2_......785
MIMAT0032712ssa-miR-92b-3p2_......785
MIMAT0032708ssa-miR-92a-3p2_......785
MIMAT0032561ssa-miR-25-3p2_......785
MIMAT0032503ssa-miR-20a-1-3p8_......385
MIMAT0031725bbe-miR-92d-3p2_......785
MIMAT0031723bbe-miR-92c-3p2_......785
MIMAT0031722bbe-miR-92b-3p2_......785
MIMAT0031720bbe-miR-92a-3p2_......785
MIMAT0031626bbe-miR-2063-5p2_......785
MIMAT0031618bbe-miR-2059-5p2_......785
MIMAT0030650prd-miR-7912-5p2_......785
MIMAT0030603prd-miR-235-3p2_......785
MIMAT0030485prd-miR-7870-3p8_......385
MIMAT0030433bta-miR-78588......_385
MIMAT0030050oar-miR-251_......685
MIMAT0032202lva-miR-92b-3p2_......785
MIMAT0032201lva-miR-92a-3p2_......785
MIMAT0032154pmi-miR-92d-3p2_......785
MIMAT0032153pmi-miR-92c-3p2_......785
MIMAT0032152pmi-miR-92b-3p2_......785
MIMAT0032151pmi-miR-92a-3p2_......785
MIMAT0029807mmu-miR-219b-3p3......_885
MIMAT0029758cbn-miR-7620b2_......785
MIMAT0029757cbn-miR-2352_......785
MIMAT0029571ipu-miR-75722_......785
MIMAT0029530ipu-miR-92b2_......785
MIMAT0029529ipu-miR-92a2_......785
MIMAT0029484ipu-miR-252_......785
MIMAT0031142aja-miR-252_......785
MIMAT0029092gga-miR-7469-5p8_......385
MIMAT0028519mdo-miR-92b-3p2_......785
MIMAT0028483mdo-miR-7258-3p7_......285
MIMAT0026324ccr-miR-92b2_......785
MIMAT0026323ccr-miR-92a2_......785
MIMAT0026280ccr-miR-252_......785
MIMAT0025151mmu-miR-63997_......285
MIMAT0025039sma-miR-3479-3p2_......785
MIMAT0024994hme-miR-92b2_......785
MIMAT0024993hme-miR-92a2_......785
MIMAT0024471mse-miR-92a2_......785
MIMAT0024028ptr-miR-92b2_......785
MIMAT0024012cgr-miR-92b-3p2_......785
MIMAT0024010cgr-miR-92a-3p2_......785
MIMAT0023904cgr-miR-32-5p2_......785
MIMAT0023870cgr-miR-25-3p2_......785
MIMAT0023675ame-miR-60513......_885
MIMAT0023513spu-miR-92e2_......785
MIMAT0023512spu-miR-92d2_......785
MIMAT0023395hco-miR-5921-5p7_......285
MIMAT0023388hco-miR-2352_......785
MIMAT0023136mtr-miR57542_......785
MIMAT0022832sha-miR-92a2_......785
MIMAT0022820sha-miR-252_......785
MIMAT0022814sha-miR-130b8_......385
MIMAT0022637ola-miR-92b2_......785
MIMAT0022621ola-miR-301a-3p7_......285
MIMAT0022534ola-miR-92a2_......785
MIMAT0023087tur-miR-92-3p2_......785
MIMAT0022250sbi-miR55692_......785
MIMAT0022242sbi-miR5564b6......_185
MIMAT0021993aca-miR-92a2_......785
MIMAT0021932aca-miR-32-5p2_......785
MIMAT0021587asu-miR-5362-3p1_......685
MIMAT0021486asu-miR-92-3p2_......785
MIMAT0020118xbo-miR-92a2_......785
MIMAT0020016sko-miR-4818f2_......785
MIMAT0020015sko-miR-4818e-3p2_......785
MIMAT0020013sko-miR-4818d2_......785
MIMAT0020011sko-miR-4818b-3p2_......785
MIMAT0020009sko-miR-4818a1_......685
MIMAT0019748hsa-miR-219b-3p3......_885
MIMAT0019435pma-miR-92a2_......785
MIMAT0019407pma-miR-25b-3p2_......785
MIMAT0018439nlo-miR-92a1_......685
MIMAT0018407ngi-miR-92a1_......685
MIMAT0018787tca-miR-92c-3p2_......785
MIMAT0018616tgu-miR-252_......785
MIMAT0016927bmo-miR-92a2_......785
MIMAT0016677cin-miR-4096-3p6_......185
MIMAT0016566cin-miR-4038-3p2_......785
MIMAT0016563cin-miR-4037-5p3......_885
MIMAT0016505cin-miR-4009c-3p2_......785
MIMAT0016504cin-miR-4009b-3p2_......785
MIMAT0016502cin-miR-4009a-3p2_......785
MIMAT0016424cin-miR-92d-3p2_......785
MIMAT0016422cin-miR-92e-3p2_......785
MIMAT0016416cin-miR-367-3p2_......785
MIMAT0016275sja-miR-3479-3p2_......785
MIMAT0016271sja-miR-3103_......885
MIMAT0015744ppy-miR-92b2_......785
MIMAT0015668nvi-miR-92a1_......685
MIMAT0015606bmo-miR-34026_......185
MIMAT0015409bmo-miR-32278......_385
MIMAT0014743api-miR-92b2_......785
MIMAT0014742api-miR-92a2_......785
MIMAT0014584tgu-miR-322_......785
MIMAT0014574tgu-miR-92-3p2_......785
MIMAT0014399cqu-miR-921_......685
MIMAT0014228aae-miR-92a-3p2_......785
MIMAT0014111bma-miR-922_......785
MIMAT0013909ssc-miR-92b-3p2_......785
MIMAT0013908ssc-miR-92a2_......785
MIMAT0020949osa-miR2876-5p1......_685
MIMAT0013180eca-miR-322_......785
MIMAT0013089eca-miR-92a2_......785
MIMAT0013057eca-miR-252_......785
MIMAT0012966eca-miR-92b2_......785
MIMAT0012797oan-miR-92c2_......785
MIMAT0012399dps-miR-2567c-3p2_......785
MIMAT0012371dps-miR-2507b-3p2_......785
MIMAT0012367dps-miR-2553-3p2_......785
MIMAT0012244dps-miR-92c-3p2_......785
MIMAT0012242dps-miR-311-3p2_......785
MIMAT0011558crm-miR-235-3p2_......785
MIMAT0011474cbr-miR-235b-3p2_......785
MIMAT0011232sme-miR-2151-3p2_......785
MIMAT0010010bfl-miR-92c2_......785
MIMAT0009989bfl-miR-20632_......785
MIMAT0009985bfl-miR-2059-3p2_......785
MIMAT0009664spu-miR-92c2_......785
MIMAT0009663spu-miR-92b-3p2_......785
MIMAT0009662spu-miR-92a2_......785
MIMAT0009621sko-miR-92c2_......785
MIMAT0009620sko-miR-92b2_......785
MIMAT0009619sko-miR-92a2_......785
MIMAT0009522cte-miR-92c1_......685
MIMAT0009520cte-miR-92a2_......785
MIMAT0009479bfl-miR-92b-3p2_......785
MIMAT0009478bfl-miR-92a2_......785
MIMAT0009384bta-miR-92b2_......785
MIMAT0009283bta-miR-322_......785
MIMAT0009116dya-miR-311b2_......785
MIMAT0009111dya-miR-92a2_......785
MIMAT0009108dya-miR-3122_......785
MIMAT0009092dya-miR-3102_......785
MIMAT0009091dya-miR-311a2_......785
MIMAT0008998dwi-miR-92a2_......785
MIMAT0008979dvi-miR-92a-3p2_......785
MIMAT0008934dvi-miR-310-3p2_......785
MIMAT0008918dvi-miR-313-3p2_......785
MIMAT0008898dsi-miR-92a2_......785
MIMAT0008875dsi-miR-312-3p2_......785
MIMAT0008874dsi-miR-3132_......785
MIMAT0008857dsi-miR-3112_......785
MIMAT0008841dsi-miR-3102_......785
MIMAT0008831dse-miR-3132_......785
MIMAT0008810dse-miR-3122_......785
MIMAT0008799dse-miR-3112_......785
MIMAT0008785dse-miR-92a2_......785
MIMAT0008779dse-miR-3102_......785
MIMAT0008763dpe-miR-92a2_......785
MIMAT0008696dmo-miR-3132_......785
MIMAT0008633dmo-miR-92a2_......785
MIMAT0008571dgr-miR-92a2_......785
MIMAT0008553der-miR-310a2_......785
MIMAT0008536der-miR-3122_......785
MIMAT0008522der-miR-311c2_......785
MIMAT0008520der-miR-311b2_......785
MIMAT0008493der-miR-92a2_......785
MIMAT0008489der-miR-311a2_......785
MIMAT0008485der-miR-310b2_......785
MIMAT0008475dan-miR-311b2_......785
MIMAT0008471dan-miR-311a2_......785
MIMAT0008425dan-miR-3102_......785
MIMAT0008422dan-miR-3122_......785
MIMAT0008412dan-miR-92a2_......785
MIMAT0008368tca-miR-92b-3p1_......685
MIMAT0008367tca-miR-92a-3p1_......685
MIMAT0011149xla-miR-92a2_......785
MIMAT0006703cfa-miR-92b2_......785
MIMAT0006697cfa-miR-252_......785
MIMAT0006653cfa-miR-92a2_......785
MIMAT0006597cfa-miR-322_......785
MIMAT0006177mml-miR-92b-3p2_......785
MIMAT0007729gga-miR-18112_......785
MIMAT0007594gga-miR-17021_......685
MIMAT0006125csa-miR-92c2_......785
MIMAT0006124csa-miR-92b2_......785
MIMAT0006123csa-miR-92a2_......785
MIMAT0006098cin-miR-92c-3p2_......785
MIMAT0006097cin-miR-92b-3p2_......785
MIMAT0006096cin-miR-92a-3p2_......785
MIMAT0006081odi-miR-92b2_......785
MIMAT0006080odi-miR-92a2_......785
MIMAT0006045odi-miR-14922_......785
MIMAT0007300oan-miR-1421ab-2-3p6_......185
MIMAT0007268oan-miR-32-5p2_......785
MIMAT0007252oan-miR-1421ab-3p6_......185
MIMAT0006918oan-miR-92b2_......785
MIMAT0006858oan-miR-92a-3p2_......785
MIMAT0006850oan-miR-106-3p8_......385
MIMAT0005340rno-miR-92b-3p2_......785
MIMAT0005199ppt-miR1071-5p8......_385
MIMAT0020875dme-miR-978-5p6_......185
MIMAT0004435ame-miR-92a1_......685
MIMAT0004899mmu-miR-92b-3p2_......785
MIMAT0004295cbr-miR-235a2_......785
MIMAT0004179mdo-miR-252_......785
MIMAT0004171mdo-miR-92a-3p2_......785
MIMAT0026696mdo-miR-191-3p8_......385
MIMAT0004095mdo-miR-32-5p2_......785
MIMAT0003991sme-miR-92-3p2_......785
MIMAT0003855bta-miR-3631_......685
MIMAT0003853bta-miR-252_......785
MIMAT0009383bta-miR-92a2_......785
MIMAT0003674xtr-miR-252_......785
MIMAT0003658xtr-miR-92b2_......785
MIMAT0003580xtr-miR-92a2_......785
MIMAT0003904ppt-miR12153_......885
MIMAT0003218hsa-miR-92b-3p2_......785
MIMAT0002925tni-miR-922_......785
MIMAT0002924fru-miR-922_......785
MIMAT0002915tni-miR-252_......785
MIMAT0002914fru-miR-252_......785
MIMAT0002803mne-miR-922_......785
MIMAT0026604mml-miR-106a-3p8_......385
MIMAT0002782mne-miR-252_......785
MIMAT0002779lla-miR-252_......785
MIMAT0002774mml-miR-252_......785
MIMAT0002771ptr-miR-252_......785
MIMAT0002768ppy-miR-252_......785
MIMAT0002765ppa-miR-252_......785
MIMAT0002760ggo-miR-252_......785
MIMAT0002720lla-miR-922_......785
MIMAT0002713sla-miR-922_......785
MIMAT0002706mml-miR-92a-3p2_......785
MIMAT0002699ptr-miR-922_......785
MIMAT0002692ppy-miR-922_......785
MIMAT0002685ppa-miR-922_......785
MIMAT0002678age-miR-922_......785
MIMAT0002671lca-miR-922_......785
MIMAT0002664ggo-miR-922_......785
MIMAT0002391ppa-miR-322_......785
MIMAT0002390mne-miR-322_......785
MIMAT0002389sla-miR-322_......785
MIMAT0002388ppy-miR-322_......785
MIMAT0002387ggo-miR-322_......785
MIMAT0002386ptr-miR-322_......785
MIMAT0002385mml-miR-32-5p2_......785
MIMAT0002149ssc-miR-322_......785
MIMAT0001809dre-miR-92b-3p2_......785
MIMAT0001808dre-miR-92a-3p2_......785
MIMAT0001793dre-miR-25-3p2_......785
MIMAT0031939dre-miR-20b-3p8_......385
MIMAT0001527aga-miR-92a2_......785
MIMAT0001226dps-miR-92a2_......785
MIMAT0001125gga-miR-32-5p2_......785
MIMAT0001109gga-miR-92-3p2_......785
MIMAT0000816rno-miR-92a-3p2_......785
MIMAT0017103rno-miR-32-3p6......_185
MIMAT0000811rno-miR-32-5p2_......785
MIMAT0000795rno-miR-25-3p2_......785
MIMAT0000654mmu-miR-32-5p2_......785
MIMAT0000652mmu-miR-25-3p2_......785
MIMAT0000539mmu-miR-92a-3p2_......785
MIMAT0000405dme-miR-313-3p2_......785
MIMAT0000404dme-miR-312-3p2_......785
MIMAT0000403dme-miR-311-3p2_......785
MIMAT0000402dme-miR-310-3p2_......785
MIMAT0000334dme-miR-92a-3p2_......785
MIMAT0000290cel-miR-235-3p2_......785
MIMAT0004517hsa-miR-106a-3p7_......285
MIMAT0000092hsa-miR-92a-3p2_......785
MIMAT0000090hsa-miR-32-5p2_......785
MIMAT0000081hsa-miR-25-3p2_......785