VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>prv-miR-8-3p
accggugu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`accggtgt`	8
MIMAT0037302	ame-miR-3478	8	`_.......`	2	87
MIMAT0032968	ppc-miR-8251-5p	7	`......._`	1	87
MIMAT0032968	ppc-miR-8251-5p	2	`......__`	7	75
MIMAT0030839	prd-miR-7968-3p	7	`......._`	1	87
MIMAT0030839	prd-miR-7968-3p	2	`......__`	7	75
MIMAT0029927	cbn-miR-36	7	`_.......`	1	87
MIMAT0033621	sma-miR-8454-3p	1	`......t.`	8	87
MIMAT0033621	sma-miR-8454-3p	6	`......__`	1	75
MIMAT0030300	bdi-miR7775-5p	1	`......t.`	8	87
MIMAT0030300	bdi-miR7775-5p	6	`......__`	1	75
MIMAT0035795	tae-miR397-5p	7	`_......_`	2	75
MIMAT0035259	gsa-miR-36-3p	7	`_......_`	2	75
MIMAT0035119	efu-miR-582	3	`......__`	8	75
MIMAT0035119	efu-miR-582	8	`......__`	3	75
MIMAT0033627	sma-miR-8457-3p	7	`_......_`	2	75
MIMAT0033515	sma-miR-36b-3p	7	`_......_`	2	75
MIMAT0033467	str-miR-37b-3p	7	`_......_`	2	75
MIMAT0033459	str-miR-8393-3p	7	`_......_`	2	75
MIMAT0033455	str-miR-37a-3p	7	`_......_`	2	75
MIMAT0033453	str-miR-8392-3p	8	`_......_`	3	75
MIMAT0033437	str-miR-40-3p	7	`_......_`	2	75
MIMAT0033433	str-miR-8386-3p	8	`_......_`	3	75
MIMAT0033233	ppc-miR-2235a-9-3p	7	`_......_`	2	75
MIMAT0033070	ppc-miR-8283-3p	7	`_......_`	2	75
MIMAT0033034	ppc-miR-2235a-11-3p	7	`_......_`	2	75
MIMAT0033005	ppc-miR-2235a-10-3p	7	`_......_`	2	75
MIMAT0032953	ppc-miR-2235d-3p	7	`_......_`	2	75
MIMAT0032951	ppc-miR-2235c-3p	7	`_......_`	2	75
MIMAT0032946	ppc-miR-8243-5p	7	`_......_`	2	75
MIMAT0032913	ppc-miR-8232-3p	7	`_......_`	2	75
MIMAT0032901	ppc-miR-8228-3p	2	`......__`	7	75
MIMAT0032901	ppc-miR-8228-3p	7	`......__`	2	75
MIMAT0032889	ppc-miR-42c-3p	7	`_......_`	2	75
MIMAT0032883	ppc-miR-36-3p	7	`_......_`	2	75
MIMAT0032851	ppc-miR-2235b-3p	7	`_......_`	2	75
MIMAT0032775	ath-miR8176	3	`_......_`	8	75
MIMAT0032683	ssa-miR-731-3p	6	`_......_`	1	75
MIMAT0031749	bma-miR-36a	7	`_......_`	2	75
MIMAT0030890	stu-miR8000	6	`__......`	1	75
MIMAT0030813	prd-miR-39-3p	7	`_......_`	2	75
MIMAT0030715	prd-miR-35a-3p	7	`_......_`	2	75
MIMAT0030681	prd-miR-40-3p	7	`_......_`	2	75
MIMAT0030567	prd-miR-37-3p	7	`_......_`	2	75
MIMAT0030557	prd-miR-7940b-3p	7	`_......_`	2	75
MIMAT0030531	prd-miR-36-3p	7	`_......_`	2	75
MIMAT0030511	prd-miR-35b-3p	7	`_......_`	2	75
MIMAT0029941	cbn-miR-35n	7	`_......_`	2	75
MIMAT0029940	cbn-miR-35m	7	`_......_`	2	75
MIMAT0029939	cbn-miR-35l	7	`_......_`	2	75
MIMAT0029938	cbn-miR-35k	7	`_......_`	2	75
MIMAT0029937	cbn-miR-35j	7	`_......_`	2	75
MIMAT0029936	cbn-miR-35i	7	`_......_`	2	75
MIMAT0029935	cbn-miR-35h	7	`_......_`	2	75
MIMAT0029934	cbn-miR-35g	7	`_......_`	2	75
MIMAT0029933	cbn-miR-35f	7	`_......_`	2	75
MIMAT0029932	cbn-miR-35e	7	`_......_`	2	75
MIMAT0029931	cbn-miR-35d	7	`_......_`	2	75
MIMAT0029930	cbn-miR-35c	7	`_......_`	2	75
MIMAT0029929	cbn-miR-35b	7	`_......_`	2	75
MIMAT0029928	cbn-miR-35a	7	`_......_`	2	75
MIMAT0029926	cbn-miR-38	7	`_......_`	2	75
MIMAT0029925	cbn-miR-39	7	`_......_`	2	75
MIMAT0029924	crm-miR-35i	7	`_......_`	2	75
MIMAT0029921	crm-miR-36	7	`_......_`	2	75
MIMAT0029920	crm-miR-35h	7	`_......_`	2	75
MIMAT0029919	cbr-miR-35g	7	`_......_`	2	75
MIMAT0029918	cbr-miR-35f	7	`_......_`	2	75
MIMAT0029861	mmu-miR-7676-3p	2	`_......_`	7	75
MIMAT0029339	lja-miR7523b	8	`_......_`	3	75
MIMAT0029338	lja-miR7523a	8	`_......_`	3	75
MIMAT0027895	mmu-miR-6996-3p	1	`__......`	6	75
MIMAT0025380	ssc-miR-582	3	`......__`	8	75
MIMAT0025380	ssc-miR-582	8	`......__`	3	75
MIMAT0025296	mja-miR-6489-5p	8	`_......_`	3	75
MIMAT0025041	sma-miR-36a-3p	7	`_......_`	2	75
MIMAT0023804	cgr-miR-181d-3p	8	`_......_`	3	75
MIMAT0023444	hco-miR-40a	7	`_......_`	2	75
MIMAT0023430	hco-miR-40d	7	`_......_`	2	75
MIMAT0023429	hco-miR-40c	7	`_......_`	2	75
MIMAT0023323	hco-miR-40b	7	`_......_`	2	75
MIMAT0023050	tur-miR-5730-5p	7	`_......_`	2	75
MIMAT0021549	asu-miR-5348-3p	7	`_......_`	2	75
MIMAT0021547	asu-miR-36f-3p	7	`_......_`	2	75
MIMAT0021448	asu-miR-36e-3p	7	`_......_`	2	75
MIMAT0021446	asu-miR-36d-3p	7	`_......_`	2	75
MIMAT0021444	asu-miR-36c-3p	7	`_......_`	2	75
MIMAT0021442	asu-miR-36b-3p	7	`_......_`	2	75
MIMAT0021440	asu-miR-36a-3p	7	`_......_`	2	75
MIMAT0021388	rmi-miR-5316b	7	`_......_`	2	75
MIMAT0021387	rmi-miR-5316a	7	`_......_`	2	75
MIMAT0021172	mtr-miR2586b	1	`__......`	6	75
MIMAT0021068	gma-miR169i-3p	1	`_......_`	6	75
MIMAT0020533	ath-miR5027	1	`......__`	6	75
MIMAT0020533	ath-miR5027	6	`......__`	1	75
MIMAT0019947	hsa-miR-4783-3p	3	`_......_`	8	75
MIMAT0019721	hsa-miR-4655-5p	6	`_......_`	1	75
MIMAT0018883	tca-miR-3791-3p	7	`_......_`	2	75
MIMAT0018827	tca-miR-3867-3p	7	`__......`	2	75
MIMAT0018570	ame-miR-3791	7	`_......_`	2	75
MIMAT0016421	cin-miR-92e-5p	1	`__......`	6	75
MIMAT0017899	rno-miR-3594-3p	7	`__......`	2	75
MIMAT0016962	rlcv-miR-rL1-35-5p	6	`_......_`	1	75
MIMAT0016258	sja-miR-36-3p	7	`_......_`	2	75
MIMAT0014103	bma-miR-36b	7	`_......_`	2	75
MIMAT0014102	bma-miR-36c	7	`_......_`	2	75
MIMAT0019195	rlcv-miR-rL1-30-5p	1	`......__`	6	75
MIMAT0019195	rlcv-miR-rL1-30-5p	6	`......__`	1	75
MIMAT0013104	eca-miR-582-3p	3	`......__`	8	75
MIMAT0013104	eca-miR-582-3p	8	`......__`	3	75
MIMAT0012719	hvt-miR-H7-3p	1	`......__`	6	75
MIMAT0012719	hvt-miR-H7-3p	6	`......__`	1	75
MIMAT0013530	cte-miR-36	7	`_......_`	2	75
MIMAT0011720	ppc-miR-2251a	7	`_......_`	2	75
MIMAT0011714	ppc-miR-38	7	`_......_`	2	75
MIMAT0011690	ppc-miR-2240a	7	`_......_`	2	75
MIMAT0011681	ppc-miR-2235a-3p	7	`_......_`	2	75
MIMAT0011654	ppc-miR-42b	7	`_......_`	2	75
MIMAT0011647	ppc-miR-37	7	`_......_`	2	75
MIMAT0011641	ppc-miR-42a	7	`_......_`	2	75
MIMAT0011605	crm-miR-35g	7	`_......_`	2	75
MIMAT0011603	crm-miR-38	7	`_......_`	2	75
MIMAT0011532	crm-miR-42	7	`_......_`	2	75
MIMAT0011514	crm-miR-35f	7	`_......_`	2	75
MIMAT0011513	crm-miR-35e	7	`_......_`	2	75
MIMAT0011739	crm-miR-35d	7	`_......_`	2	75
MIMAT0011512	crm-miR-35c-3p	7	`_......_`	2	75
MIMAT0011511	crm-miR-35b	7	`_......_`	2	75
MIMAT0011510	crm-miR-35a	7	`_......_`	2	75
MIMAT0011506	crm-miR-39	7	`_......_`	2	75
MIMAT0011505	crm-miR-40	7	`_......_`	2	75
MIMAT0011504	crm-miR-41	7	`_......_`	2	75
MIMAT0011489	cbr-miR-41b	7	`_......_`	2	75
MIMAT0011483	cbr-miR-35b	7	`_......_`	2	75
MIMAT0011470	cbr-miR-35d-3p	7	`_......_`	2	75
MIMAT0011468	cbr-miR-35e	7	`_......_`	2	75
MIMAT0011467	cbr-miR-35c	7	`_......_`	2	75
MIMAT0020940	sbi-miR397-3p	7	`_......_`	2	75
MIMAT0011261	sme-miR-36c-3p	7	`_......_`	2	75
MIMAT0011242	sme-miR-36b-3p	7	`_......_`	2	75
MIMAT0007580	gga-miR-1689-3p	1	`_......_`	6	75
MIMAT0007492	gga-miR-1624	6	`__......`	1	75
MIMAT0017296	rno-miR-181d-3p	7	`_......_`	2	75
MIMAT0017264	mmu-miR-181d-3p	8	`_......_`	3	75
MIMAT0003982	sme-miR-36a-3p	7	`_......_`	2	75
MIMAT0004832	ppt-miR1220b	3	`_......_`	8	75
MIMAT0004831	ppt-miR1220a	3	`_......_`	8	75
MIMAT0026608	hsa-miR-181d-3p	7	`_......_`	2	75
MIMAT0001318	cbr-miR-41a	7	`_......_`	2	75
MIMAT0001317	cbr-miR-40	7	`_......_`	2	75
MIMAT0001316	cbr-miR-39	7	`_......_`	2	75
MIMAT0001315	cbr-miR-38	7	`_......_`	2	75
MIMAT0001314	cbr-miR-36	7	`_......_`	2	75
MIMAT0001313	cbr-miR-35a	7	`_......_`	2	75
MIMAT0000467	cbr-miR-42	6	`_......_`	1	75
MIMAT0000013	cel-miR-42-3p	7	`_......_`	2	75
MIMAT0000012	cel-miR-41-3p	7	`_......_`	2	75
MIMAT0000011	cel-miR-40-3p	7	`_......_`	2	75
MIMAT0000010	cel-miR-39-3p	7	`_......_`	2	75
MIMAT0000009	cel-miR-38-3p	7	`_......_`	2	75
MIMAT0000008	cel-miR-37-3p	7	`_......_`	2	75
MIMAT0000007	cel-miR-36-3p	7	`_......_`	2	75
MIMAT0000006	cel-miR-35-3p	7	`_......_`	2	75