VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>prv-miR-11-1
accuguu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`acctgtt`	7
MIMAT0021090	osa-miR5145	1	`.......`	7	100
MIMAT0017360	rno-miR-582-3p	2	`.......`	8	100
MIMAT0008233	ptr-miR-552	7	`.......`	1	100
MIMAT0007264	oan-miR-1421af-5p	7	`.......`	1	100
MIMAT0007261	oan-miR-1421ae	7	`.......`	1	100
MIMAT0007259	oan-miR-1421ad-5p	7	`.......`	1	100
MIMAT0007249	oan-miR-1421aa-5p	7	`.......`	1	100
MIMAT0007236	oan-miR-1421v-5p	7	`.......`	1	100
MIMAT0007086	oan-miR-1421t-5p	7	`.......`	1	100
MIMAT0007082	oan-miR-1421r-5p	7	`.......`	1	100
MIMAT0007066	oan-miR-1421k-5p	7	`.......`	1	100
MIMAT0003215	hsa-miR-552-3p	7	`.......`	1	100
MIMAT0037025	ssc-miR-9807-5p	1	`_......`	6	85
MIMAT0036862	oha-miR-26-1-3p	3	`_......`	8	85
MIMAT0036673	oha-miR-125a-3p	6	`......_`	1	85
MIMAT0036274	chi-miR-543-5p	1	`......_`	6	85
MIMAT0036104	chi-miR-26b-3p	1	`_......`	6	85
MIMAT0035924	chi-miR-125a-3p	6	`......_`	1	85
MIMAT0035758	tae-miR9652-5p	1	`_......`	6	85
MIMAT0035675	bra-miR9560b-5p	6	`......_`	1	85
MIMAT0035673	bra-miR9560a-5p	6	`......_`	1	85
MIMAT0034572	eca-miR-9030	7	`_......`	2	85
MIMAT0032565	ssa-miR-26a-3-3p	1	`_......`	6	85
MIMAT0032310	ssa-miR-125b-3-3p	6	`......_`	1	85
MIMAT0032308	ssa-miR-125b-1-3p	6	`......_`	1	85
MIMAT0031580	bbe-miR-125a-3p	6	`......_`	1	85
MIMAT0030616	prd-miR-993-5p	1	`......_`	6	85
MIMAT0029660	cbn-miR-7621a	8	`_......`	3	85
MIMAT0031115	oan-miR-26-2-3p	1	`_......`	6	85
MIMAT0028455	mdo-miR-7244-3p	3	`......_`	8	85
MIMAT0026410	sbi-miR6222-5p	1	`_......`	6	85
MIMAT0027983	mmu-miR-7039-3p	1	`_......`	6	85
MIMAT0027929	mmu-miR-7012-3p	3	`......_`	8	85
MIMAT0027896	mmu-miR-6997-5p	7	`_......`	2	85
MIMAT0027811	mmu-miR-6955-3p	3	`......_`	8	85
MIMAT0027775	mmu-miR-6937-3p	8	`......_`	3	85
MIMAT0025645	gga-miR-6569-5p	3	`_......`	8	85
MIMAT0024811	hvu-miR6187	8	`_......`	3	85
MIMAT0023985	cgr-miR-582	3	`......_`	8	85
MIMAT0023873	cgr-miR-26b-3p	1	`_......`	6	85
MIMAT0023742	cgr-miR-125a-3p	6	`......_`	1	85
MIMAT0022810	sha-miR-125b	6	`......_`	1	85
MIMAT0022639	ola-miR-125a-3p	6	`......_`	1	85
MIMAT0021903	aca-miR-26-1-3p	1	`_......`	6	85
MIMAT0021728	aca-miR-125a-3p	6	`......_`	1	85
MIMAT0021169	mtr-miR2592am	7	`_......`	2	85
MIMAT0021168	mtr-miR2592al	7	`_......`	2	85
MIMAT0021166	mtr-miR2592aj	7	`_......`	2	85
MIMAT0021165	mtr-miR2592ai	7	`_......`	2	85
MIMAT0021164	mtr-miR2592ah	7	`_......`	2	85
MIMAT0021162	mtr-miR2592af	7	`_......`	2	85
MIMAT0021161	mtr-miR2592ae	7	`_......`	2	85
MIMAT0021160	mtr-miR2592ad	7	`_......`	2	85
MIMAT0021159	mtr-miR2592ac	7	`_......`	2	85
MIMAT0021158	mtr-miR2592ab	7	`_......`	2	85
MIMAT0021156	mtr-miR2592z	7	`_......`	2	85
MIMAT0021155	mtr-miR2592y	7	`_......`	2	85
MIMAT0021154	mtr-miR2592x	7	`_......`	2	85
MIMAT0021153	mtr-miR2592w	7	`_......`	2	85
MIMAT0021152	mtr-miR2592v	7	`_......`	2	85
MIMAT0021151	mtr-miR2592u	7	`_......`	2	85
MIMAT0021149	mtr-miR2592t	7	`_......`	2	85
MIMAT0022985	mmu-miR-5107-3p	3	`......_`	8	85
MIMAT0020238	egr-miR-87-5p	3	`......_`	8	85
MIMAT0020196	dme-miR-4969-3p	3	`......_`	8	85
MIMAT0019271	oar-miR-543-5p	1	`......_`	6	85
MIMAT0018934	hsa-miR-4421	1	`......_`	6	85
MIMAT0016675	cin-miR-4094-3p	8	`_......`	3	85
MIMAT0016457	cin-miR-4001f-3p	1	`_......`	6	85
MIMAT0016451	cin-miR-4001c-3p	1	`_......`	6	85
MIMAT0016449	cin-miR-4002-3p	1	`_......`	6	85
MIMAT0015749	ppy-miR-125a-3p	6	`......_`	1	85
MIMAT0013009	eca-miR-125a-3p	6	`......_`	1	85
MIMAT0026929	mdo-miR-26-2-3p	1	`_......`	6	85
MIMAT0026925	mtr-miR2592s-5p	8	`_......`	3	85
MIMAT0020944	mtr-miR2592q-5p	7	`_......`	2	85
MIMAT0020943	mtr-miR2592o-5p	7	`_......`	2	85
MIMAT0020942	mtr-miR2592e-5p	7	`_......`	2	85
MIMAT0020941	mtr-miR2592d-5p	7	`_......`	2	85
MIMAT0026924	mtr-miR2592b-5p	8	`_......`	3	85
MIMAT0019161	spu-miR-125-3p	6	`......_`	1	85
MIMAT0019147	bfl-miR-125a-3p	6	`......_`	1	85
MIMAT0008300	ptr-miR-649	3	`......_`	8	85
MIMAT0007991	ptr-miR-1267	1	`_......`	6	85
MIMAT0007984	ptr-miR-125a	6	`......_`	1	85
MIMAT0007852	osa-miR1883b	1	`......_`	6	85
MIMAT0007851	osa-miR1883a	1	`......_`	6	85
MIMAT0006487	mml-miR-649	3	`......_`	8	85
MIMAT0006182	mml-miR-125a-3p	6	`......_`	1	85
MIMAT0026801	mml-miR-26b-3p	1	`_......`	6	85
MIMAT0005921	hsa-miR-1267	1	`_......`	6	85
MIMAT0026742	hsa-miR-1266-3p	2	`_......`	7	85
MIMAT0005292	mmu-miR-582-3p	3	`......_`	8	85
MIMAT0026661	mdo-miR-125b-1-3p	6	`......_`	1	85
MIMAT0003345	sv40-miR-S1-3p	2	`_......`	7	85
MIMAT0003319	hsa-miR-649	3	`......_`	8	85
MIMAT0031965	dre-miR-125b-3-3p	6	`......_`	1	85
MIMAT0017132	rno-miR-146a-3p	1	`......_`	6	85
MIMAT0004729	rno-miR-125a-3p	6	`......_`	1	85
MIMAT0004714	rno-miR-26b-3p	1	`_......`	6	85
MIMAT0017058	mmu-miR-26a-2-3p	1	`_......`	6	85
MIMAT0004630	mmu-miR-26b-3p	1	`_......`	6	85
MIMAT0004602	hsa-miR-125a-3p	6	`......_`	1	85
MIMAT0004528	mmu-miR-125a-3p	6	`......_`	1	85
MIMAT0004500	hsa-miR-26b-3p	1	`_......`	6	85